HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:9.4 nTPM
HPA Brain:16.9 nTPM
GTEx:9.4 nTPM
FANTOM5:3.5 Scaled Tags Per Million
Pig:11.7 nTPM
Mouse:18.2 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055849
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.9
Sample id Sample description nTPM
Hippocampus
nTPM: 12.4
2621 Female, age 67, right hemisphere 15.4
1911 Female, age 85, right hemisphere 14.1
2148 Female, age 91, left hemisphere 12.6
2529 Female, age 94, left hemisphere 12.1
1898 Male, age 80, left hemisphere 11.6
1855 Male, age 76, left hemisphere 8.7
Dentate gyrus
nTPM: 12.3
2531 Female, age 67, both hemispheres 15.6
1927 Female, age 91, both hemispheres 14.4
2246 Female, age 85, both hemispheres 11.9
2528 Male, age 74, both hemispheres 11.2
2530 Female, age 94, left hemisphere 11.0
2010 Male, age 76, both hemispheres 9.8
Entorhinal gyrus
nTPM: 16.9
2613 Female, age 94, left hemisphere 26.2
2764 Male, age 80, right hemisphere 17.0
1787 Male, age 76, left hemisphere 15.9
1938 Female, age 85, left hemisphere 15.1
2686 Male, age 75, right hemisphere 15.1
2117 Female, age 91, right hemisphere 12.0
Hippocampus, CA1
nTPM: 14.0
2749 Male, age 80, left hemisphere 20.2
2527 Male, age 74, both hemispheres 15.8
2082 Female, age 91, right hemisphere 12.6
1873 Female, age 85, both hemispheres 12.2
2045 Male, age 76, both hemispheres 9.3
Hippocampus, CA2
nTPM: 12.1
1963 Male, age 80, left hemisphere 12.9
1892 Male, age 76, both hemispheres 12.8
2249 Male, age 74, both hemispheres 12.8
2113 Female, age 91, right hemisphere 12.6
2437 Female, age 94, left hemisphere 11.2
1940 Female, age 85, left hemisphere 10.5
Hippocampus, CA3
nTPM: 15.1
2137 Male, age 80, left hemisphere 18.9
2620 Female, age 94, left hemisphere 17.6
2861 Female, age 67, both hemispheres 16.8
2436 Male, age 74, both hemispheres 14.2
1891 Female, age 85, both hemispheres 11.7
1867 Male, age 76, both hemispheres 11.2
Parahippocampal cortex
nTPM: 15.8
2245 Female, age 91, both hemispheres 18.8
2622 Female, age 67, right hemisphere 18.0
1990 Female, age 91, right hemisphere 17.5
2693 Female, age 94, both hemispheres 16.0
1933 Female, age 85, both hemispheres 15.7
2250 Female, age 67, right hemisphere 15.4
1850 Male, age 80, both hemispheres 15.1
2532 Female, age 72, left hemisphere 14.9
2692 Male, age 74, both hemispheres 13.3
2018 Male, age 76, both hemispheres 13.0
Perirhinal gyrus
nTPM: 16.4
1847 Female, age 91, left hemisphere 21.0
2848 Male, age 76, right hemisphere 16.1
1794 Male, age 80, right hemisphere 15.9
1841 Female, age 85, right hemisphere 14.6
2521 Female, age 94, right hemisphere 14.6
Subiculum
nTPM: 11.7
1977 Female, age 85, both hemispheres 13.8
1901 Male, age 80, both hemispheres 13.3
2619 Male, age 74, both hemispheres 13.2
2042 Male, age 76, both hemispheres 10.8
2438 Female, age 94, left hemisphere 10.6
2729 Female, age 91, right hemisphere 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.4
Samples: 197

Max nTPM: 21.6
Min nTPM: 1.5
Std nTPM: 3.9
Median nTPM: 9.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 21.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 21.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 17.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 17.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 17.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 17.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 17.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 16.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 16.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 16.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 16.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 3.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 3.5
FF:10153-102I9 76 years, female 6.1
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.7
Pig sample Sample description nTPM
Subiculum
nTPM: 11.7
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.8
Sample A Female 14.0
Sample B Female 10.9
Sample C Male 11.2
Sample D Male 10.8
Dorsal hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 12.5
Min nTPM: 7.0
Sample A Female 10.0
Sample B Female 12.5
Sample C Male 9.3
Sample D Male 7.0
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.6
Sample A Female 9.6
Sample B Female 10.7
Sample C Male 11.9
Sample D Male 10.4
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 12.2
Min nTPM: 9.4
Sample A Female 9.4
Sample B Female 9.5
Sample C Male 11.8
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 15.7
Min nTPM: 11.6
Sample A Male 11.6
Sample B Male 14.0
Sample C Female 15.7
Sample D Female 14.2
Hippocampal formation
nTPM: 18.2
Samples: 4

Max nTPM: 19.7
Min nTPM: 16.7
Sample A Male 18.1
Sample B Male 18.1
Sample C Female 19.7
Sample D Female 16.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
1487 Antisense, RP_040420_01_D01, Mouse strain C57BL/6J (56 days, male) 1.9
1486 Antisense, RP_040420_01_D01, Mouse strain C57BL/6J (56 days, male) 0.9

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