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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
109.9
nTPM
Monaco:
212.0
nTPM
Schmiedel:
155.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.9
HPA sample
nTPM
gdT-cell nTPM: 57.8
Samples: 6
Max nTPM: 77.1
Min nTPM: 35.4
P10809_1007
35.4
P10809_1022
77.1
P10809_1041
55.7
P10809_1060
57.3
P10809_1077
56.8
P10809_1098
64.6
MAIT T-cell nTPM: 72.9
Samples: 6
Max nTPM: 90.2
Min nTPM: 51.6
P10809_1006
60.1
P10809_1024
90.2
P10809_1043
51.6
P10809_1062
76.6
P10809_1083
75.5
P10809_1097
83.3
Memory CD4 T-cell nTPM: 68.6
Samples: 6
Max nTPM: 84.9
Min nTPM: 48.6
P10809_1014
64.6
P10809_1026
48.6
P10809_1045
63.4
P10809_1064
68.2
P10809_1086
84.9
P10809_1113
82.1
Memory CD8 T-cell nTPM: 65.2
Samples: 5
Max nTPM: 79.2
Min nTPM: 52.0
P10809_1012
52.0
P10809_1027
66.1
P10809_1046
54.0
P10809_1065
74.8
P10809_1111
79.2
Naive CD4 T-cell nTPM: 62.9
Samples: 6
Max nTPM: 76.8
Min nTPM: 46.8
P10809_1015
54.4
P10809_1030
61.4
P10809_1049
46.8
P10809_1068
71.1
P10809_1085
76.8
P10809_1112
67.1
Naive CD8 T-cell nTPM: 58.6
Samples: 6
Max nTPM: 79.7
Min nTPM: 38.9
P10809_1016
38.9
P10809_1031
60.9
P10809_1050
42.4
P10809_1069
69.2
P10809_1087
79.7
P10809_1110
60.2
T-reg nTPM: 109.9
Samples: 6
Max nTPM: 129.4
Min nTPM: 89.9
P10809_1018
98.2
P10809_1037
116.4
P10809_1056
89.9
P10809_1075
125.4
P10809_1094
99.9
P10809_1106
129.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
212.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 149.4
Samples: 4
Max nTPM: 178.6
Min nTPM: 129.0
RHH5202_R3573
129.0
RHH5230_R3602
146.6
RHH5259_R3631
178.6
RHH5288_R3660
143.2
Effector memory CD8 T-cell nTPM: 212.0
Samples: 4
Max nTPM: 257.6
Min nTPM: 192.4
RHH5203_R3574
193.2
RHH5231_R3603
204.7
RHH5260_R3632
192.4
RHH5289_R3661
257.6
MAIT T-cell nTPM: 150.7
Samples: 4
Max nTPM: 166.3
Min nTPM: 117.9
RHH5233_R3605
166.3
RHH5205_R3576
159.7
RHH5262_R3634
158.9
RHH5297_R3663
117.9
Memory CD4 T-cell TFH nTPM: 169.1
Samples: 4
Max nTPM: 199.9
Min nTPM: 141.7
RHH5300_R3666
141.7
RHH5236_R3608
199.9
RHH5265_R3637
166.5
RHH5208_R3579
168.3
Memory CD4 T-cell Th1 nTPM: 151.9
Samples: 4
Max nTPM: 181.3
Min nTPM: 105.3
RHH5210_R3581
105.3
RHH5302_R3668
149.0
RHH5238_R3610
171.8
RHH5267_R3639
181.3
Memory CD4 T-cell Th1/Th17 nTPM: 177.4
Samples: 4
Max nTPM: 219.7
Min nTPM: 136.4
RHH5303_R3669
184.9
RHH5211_R3582
136.4
RHH5239_R3611
219.7
RHH5268_R3640
168.7
Memory CD4 T-cell Th17 nTPM: 193.4
Samples: 4
Max nTPM: 254.7
Min nTPM: 166.9
RHH5304_R3670
180.4
RHH5212_R3583
166.9
RHH5240_R3612
254.7
RHH5269_R3641
171.7
Memory CD4 T-cell Th2 nTPM: 161.5
Samples: 4
Max nTPM: 178.1
Min nTPM: 153.9
RHH5305_R3671
157.2
RHH5213_R3584
153.9
RHH5241_R3613
178.1
RHH5270_R3642
156.6
Naive CD4 T-cell nTPM: 121.1
Samples: 4
Max nTPM: 130.3
Min nTPM: 113.1
RHH5306_R3672
115.7
RHH5214_R3585
125.1
RHH5242_R3614
113.1
RHH5271_R3643
130.3
Naive CD8 T-cell nTPM: 109.2
Samples: 4
Max nTPM: 124.0
Min nTPM: 97.7
RHH5201_R3572
124.0
RHH5229_R3601
113.4
RHH5258_R3630
101.5
RHH5287_R3659
97.7
Non-Vd2 gdTCR nTPM: 186.0
Samples: 4
Max nTPM: 231.3
Min nTPM: 147.2
RHH5235_R3607
231.3
RHH5264_R3636
192.3
RHH5207_R3578
173.1
RHH5299_R3665
147.2
T-reg nTPM: 161.5
Samples: 4
Max nTPM: 187.4
Min nTPM: 139.6
RHH5301_R3667
139.6
RHH5237_R3609
187.4
RHH5266_R3638
164.5
RHH5209_R3580
154.3
Terminal effector memory CD4 T-cell nTPM: 193.0
Samples: 2
Max nTPM: 225.2
Min nTPM: 160.8
RHH5243_R3615
225.2
RHH5272_R3644
160.8
Terminal effector memory CD8 T-cell nTPM: 188.9
Samples: 4
Max nTPM: 216.5
Min nTPM: 151.6
RHH5232_R3604
201.1
RHH5204_R3575
151.6
RHH5261_R3633
216.5
RHH5296_R3662
186.2
Vd2 gdTCR nTPM: 155.8
Samples: 4
Max nTPM: 188.7
Min nTPM: 112.7
RHH5234_R3606
150.9
RHH5206_R3577
171.0
RHH5263_R3635
188.7
RHH5298_R3664
112.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
