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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
157.6
nTPM
Monaco:
509.6
nTPM
Schmiedel:
470.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
157.6
HPA sample
nTPM
gdT-cell nTPM: 157.6
Samples: 6
Max nTPM: 209.9
Min nTPM: 110.7
P10809_1007
209.9
P10809_1022
158.8
P10809_1041
156.1
P10809_1060
165.6
P10809_1077
144.6
P10809_1098
110.7
MAIT T-cell nTPM: 107.2
Samples: 6
Max nTPM: 186.5
Min nTPM: 76.1
P10809_1006
186.5
P10809_1024
82.1
P10809_1043
76.1
P10809_1062
106.8
P10809_1083
109.4
P10809_1097
82.0
Memory CD4 T-cell nTPM: 104.6
Samples: 6
Max nTPM: 162.2
Min nTPM: 80.7
P10809_1014
162.2
P10809_1026
104.5
P10809_1045
80.7
P10809_1064
89.4
P10809_1086
108.6
P10809_1113
81.9
Memory CD8 T-cell nTPM: 129.9
Samples: 5
Max nTPM: 194.3
Min nTPM: 105.4
P10809_1012
194.3
P10809_1027
122.3
P10809_1046
114.4
P10809_1065
113.1
P10809_1111
105.4
Naive CD4 T-cell nTPM: 63.7
Samples: 6
Max nTPM: 121.6
Min nTPM: 28.9
P10809_1015
121.6
P10809_1030
51.6
P10809_1049
28.9
P10809_1068
43.1
P10809_1085
83.8
P10809_1112
53.4
Naive CD8 T-cell nTPM: 92.0
Samples: 6
Max nTPM: 129.3
Min nTPM: 62.1
P10809_1016
121.8
P10809_1031
78.3
P10809_1050
82.5
P10809_1069
78.0
P10809_1087
129.3
P10809_1110
62.1
T-reg nTPM: 122.5
Samples: 6
Max nTPM: 233.4
Min nTPM: 72.3
P10809_1018
233.4
P10809_1037
103.9
P10809_1056
72.3
P10809_1075
74.2
P10809_1094
142.9
P10809_1106
108.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
509.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 294.4
Samples: 4
Max nTPM: 517.1
Min nTPM: 184.6
RHH5202_R3573
517.1
RHH5230_R3602
273.9
RHH5259_R3631
201.9
RHH5288_R3660
184.6
Effector memory CD8 T-cell nTPM: 390.2
Samples: 4
Max nTPM: 852.2
Min nTPM: 184.0
RHH5203_R3574
852.2
RHH5231_R3603
313.5
RHH5260_R3632
211.1
RHH5289_R3661
184.0
MAIT T-cell nTPM: 418.9
Samples: 4
Max nTPM: 811.5
Min nTPM: 192.5
RHH5233_R3605
450.9
RHH5205_R3576
811.5
RHH5262_R3634
220.6
RHH5297_R3663
192.5
Memory CD4 T-cell TFH nTPM: 275.2
Samples: 4
Max nTPM: 622.6
Min nTPM: 149.1
RHH5300_R3666
162.5
RHH5236_R3608
166.7
RHH5265_R3637
149.1
RHH5208_R3579
622.6
Memory CD4 T-cell Th1 nTPM: 297.8
Samples: 4
Max nTPM: 541.8
Min nTPM: 163.9
RHH5210_R3581
541.8
RHH5302_R3668
163.9
RHH5238_R3610
294.5
RHH5267_R3639
190.8
Memory CD4 T-cell Th1/Th17 nTPM: 316.1
Samples: 4
Max nTPM: 565.9
Min nTPM: 182.3
RHH5303_R3669
182.3
RHH5211_R3582
565.9
RHH5239_R3611
295.5
RHH5268_R3640
220.6
Memory CD4 T-cell Th17 nTPM: 309.3
Samples: 4
Max nTPM: 549.0
Min nTPM: 184.2
RHH5304_R3670
215.9
RHH5212_R3583
549.0
RHH5240_R3612
288.0
RHH5269_R3641
184.2
Memory CD4 T-cell Th2 nTPM: 361.9
Samples: 4
Max nTPM: 771.8
Min nTPM: 168.6
RHH5305_R3671
168.6
RHH5213_R3584
771.8
RHH5241_R3613
305.7
RHH5270_R3642
201.3
Naive CD4 T-cell nTPM: 193.1
Samples: 4
Max nTPM: 369.8
Min nTPM: 116.3
RHH5306_R3672
116.3
RHH5214_R3585
369.8
RHH5242_R3614
154.3
RHH5271_R3643
132.1
Naive CD8 T-cell nTPM: 176.5
Samples: 4
Max nTPM: 344.6
Min nTPM: 92.2
RHH5201_R3572
344.6
RHH5229_R3601
166.8
RHH5258_R3630
92.2
RHH5287_R3659
102.5
Non-Vd2 gdTCR nTPM: 509.6
Samples: 4
Max nTPM: 945.6
Min nTPM: 281.2
RHH5235_R3607
518.4
RHH5264_R3636
281.2
RHH5207_R3578
945.6
RHH5299_R3665
293.1
T-reg nTPM: 235.5
Samples: 4
Max nTPM: 475.1
Min nTPM: 147.7
RHH5301_R3667
151.9
RHH5237_R3609
167.2
RHH5266_R3638
147.7
RHH5209_R3580
475.1
Terminal effector memory CD4 T-cell nTPM: 324.8
Samples: 2
Max nTPM: 396.8
Min nTPM: 252.7
RHH5243_R3615
396.8
RHH5272_R3644
252.7
Terminal effector memory CD8 T-cell nTPM: 376.8
Samples: 4
Max nTPM: 685.6
Min nTPM: 233.9
RHH5232_R3604
314.9
RHH5204_R3575
685.6
RHH5261_R3633
272.9
RHH5296_R3662
233.9
Vd2 gdTCR nTPM: 447.8
Samples: 4
Max nTPM: 782.2
Min nTPM: 257.4
RHH5234_R3606
438.3
RHH5206_R3577
782.2
RHH5263_R3635
313.2
RHH5298_R3664
257.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.