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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.8
nTPM
Monaco:
82.4
nTPM
Schmiedel:
111.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.8
HPA sample
nTPM
gdT-cell nTPM: 74.1
Samples: 6
Max nTPM: 100.3
Min nTPM: 51.2
P10809_1007
51.2
P10809_1022
82.5
P10809_1041
100.3
P10809_1060
79.5
P10809_1077
65.5
P10809_1098
65.7
MAIT T-cell nTPM: 74.6
Samples: 6
Max nTPM: 85.5
Min nTPM: 60.2
P10809_1006
60.2
P10809_1024
85.5
P10809_1043
81.4
P10809_1062
69.7
P10809_1083
83.0
P10809_1097
67.6
Memory CD4 T-cell nTPM: 78.6
Samples: 6
Max nTPM: 100.5
Min nTPM: 61.8
P10809_1014
61.8
P10809_1026
100.5
P10809_1045
96.7
P10809_1064
63.0
P10809_1086
74.9
P10809_1113
74.4
Memory CD8 T-cell nTPM: 79.1
Samples: 5
Max nTPM: 91.7
Min nTPM: 57.9
P10809_1012
82.8
P10809_1027
91.7
P10809_1046
86.5
P10809_1065
57.9
P10809_1111
76.4
Naive CD4 T-cell nTPM: 81.5
Samples: 6
Max nTPM: 101.6
Min nTPM: 56.8
P10809_1015
56.8
P10809_1030
101.6
P10809_1049
91.9
P10809_1068
85.7
P10809_1085
75.5
P10809_1112
77.4
Naive CD8 T-cell nTPM: 73.4
Samples: 6
Max nTPM: 90.0
Min nTPM: 54.6
P10809_1016
54.6
P10809_1031
81.3
P10809_1050
90.0
P10809_1069
63.5
P10809_1087
71.1
P10809_1110
79.7
T-reg nTPM: 96.8
Samples: 6
Max nTPM: 132.0
Min nTPM: 69.0
P10809_1018
76.0
P10809_1037
89.0
P10809_1056
132.0
P10809_1075
69.0
P10809_1094
123.7
P10809_1106
91.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.2
Samples: 4
Max nTPM: 67.1
Min nTPM: 45.6
RHH5202_R3573
53.1
RHH5230_R3602
45.6
RHH5259_R3631
50.8
RHH5288_R3660
67.1
Effector memory CD8 T-cell nTPM: 61.5
Samples: 4
Max nTPM: 76.5
Min nTPM: 49.8
RHH5203_R3574
67.5
RHH5231_R3603
76.5
RHH5260_R3632
49.8
RHH5289_R3661
52.0
MAIT T-cell nTPM: 65.9
Samples: 4
Max nTPM: 96.1
Min nTPM: 36.3
RHH5233_R3605
64.3
RHH5205_R3576
36.3
RHH5262_R3634
67.0
RHH5297_R3663
96.1
Memory CD4 T-cell TFH nTPM: 73.9
Samples: 4
Max nTPM: 80.5
Min nTPM: 68.1
RHH5300_R3666
71.7
RHH5236_R3608
75.4
RHH5265_R3637
80.5
RHH5208_R3579
68.1
Memory CD4 T-cell Th1 nTPM: 54.1
Samples: 4
Max nTPM: 77.3
Min nTPM: 30.5
RHH5210_R3581
71.1
RHH5302_R3668
77.3
RHH5238_R3610
30.5
RHH5267_R3639
37.3
Memory CD4 T-cell Th1/Th17 nTPM: 61.2
Samples: 4
Max nTPM: 91.1
Min nTPM: 23.6
RHH5303_R3669
85.3
RHH5211_R3582
91.1
RHH5239_R3611
23.6
RHH5268_R3640
44.9
Memory CD4 T-cell Th17 nTPM: 50.4
Samples: 4
Max nTPM: 60.4
Min nTPM: 40.6
RHH5304_R3670
55.9
RHH5212_R3583
60.4
RHH5240_R3612
40.6
RHH5269_R3641
44.6
Memory CD4 T-cell Th2 nTPM: 59.5
Samples: 4
Max nTPM: 69.2
Min nTPM: 44.9
RHH5305_R3671
64.4
RHH5213_R3584
69.2
RHH5241_R3613
59.4
RHH5270_R3642
44.9
Naive CD4 T-cell nTPM: 58.0
Samples: 4
Max nTPM: 75.8
Min nTPM: 44.8
RHH5306_R3672
65.8
RHH5214_R3585
75.8
RHH5242_R3614
44.8
RHH5271_R3643
45.7
Naive CD8 T-cell nTPM: 57.0
Samples: 4
Max nTPM: 86.8
Min nTPM: 19.6
RHH5201_R3572
62.2
RHH5229_R3601
19.6
RHH5258_R3630
86.8
RHH5287_R3659
59.5
Non-Vd2 gdTCR nTPM: 73.5
Samples: 4
Max nTPM: 95.4
Min nTPM: 38.4
RHH5235_R3607
38.4
RHH5264_R3636
95.4
RHH5207_R3578
83.3
RHH5299_R3665
76.8
T-reg nTPM: 71.9
Samples: 4
Max nTPM: 86.9
Min nTPM: 48.5
RHH5301_R3667
84.3
RHH5237_R3609
86.9
RHH5266_R3638
48.5
RHH5209_R3580
67.8
Terminal effector memory CD4 T-cell nTPM: 57.9
Samples: 2
Max nTPM: 89.3
Min nTPM: 26.5
RHH5243_R3615
26.5
RHH5272_R3644
89.3
Terminal effector memory CD8 T-cell nTPM: 74.4
Samples: 4
Max nTPM: 88.7
Min nTPM: 52.9
RHH5232_R3604
73.8
RHH5204_R3575
88.7
RHH5261_R3633
52.9
RHH5296_R3662
82.1
Vd2 gdTCR nTPM: 82.4
Samples: 4
Max nTPM: 109.6
Min nTPM: 62.8
RHH5234_R3606
66.4
RHH5206_R3577
109.6
RHH5263_R3635
62.8
RHH5298_R3664
90.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
