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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
677.7
nTPM
Monaco:
176.9
nTPM
Schmiedel:
294.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
677.7
HPA sample
nTPM
gdT-cell nTPM: 487.7
Samples: 6
Max nTPM: 567.9
Min nTPM: 380.9
P10809_1007
463.3
P10809_1022
380.9
P10809_1041
566.7
P10809_1060
484.6
P10809_1077
567.9
P10809_1098
462.8
MAIT T-cell nTPM: 469.7
Samples: 6
Max nTPM: 549.8
Min nTPM: 303.3
P10809_1006
303.3
P10809_1024
485.1
P10809_1043
487.5
P10809_1062
469.2
P10809_1083
523.4
P10809_1097
549.8
Memory CD4 T-cell nTPM: 542.9
Samples: 6
Max nTPM: 625.8
Min nTPM: 450.6
P10809_1014
450.6
P10809_1026
625.8
P10809_1045
464.6
P10809_1064
580.9
P10809_1086
591.8
P10809_1113
543.4
Memory CD8 T-cell nTPM: 517.0
Samples: 5
Max nTPM: 636.9
Min nTPM: 374.4
P10809_1012
374.4
P10809_1027
636.9
P10809_1046
497.4
P10809_1065
580.0
P10809_1111
496.2
Naive CD4 T-cell nTPM: 437.5
Samples: 6
Max nTPM: 478.3
Min nTPM: 395.5
P10809_1015
395.5
P10809_1030
478.3
P10809_1049
422.3
P10809_1068
456.7
P10809_1085
447.0
P10809_1112
424.9
Naive CD8 T-cell nTPM: 525.0
Samples: 6
Max nTPM: 605.9
Min nTPM: 403.1
P10809_1016
490.0
P10809_1031
596.1
P10809_1050
516.3
P10809_1069
538.7
P10809_1087
605.9
P10809_1110
403.1
T-reg nTPM: 677.7
Samples: 6
Max nTPM: 832.4
Min nTPM: 496.1
P10809_1018
496.1
P10809_1037
832.4
P10809_1056
635.5
P10809_1075
744.6
P10809_1094
739.8
P10809_1106
617.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
176.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 126.7
Samples: 4
Max nTPM: 214.0
Min nTPM: 87.4
RHH5202_R3573
87.4
RHH5230_R3602
95.9
RHH5259_R3631
214.0
RHH5288_R3660
109.4
Effector memory CD8 T-cell nTPM: 116.5
Samples: 4
Max nTPM: 207.3
Min nTPM: 80.7
RHH5203_R3574
88.6
RHH5231_R3603
89.4
RHH5260_R3632
207.3
RHH5289_R3661
80.7
MAIT T-cell nTPM: 122.6
Samples: 4
Max nTPM: 145.5
Min nTPM: 104.7
RHH5233_R3605
104.7
RHH5205_R3576
123.4
RHH5262_R3634
145.5
RHH5297_R3663
116.9
Memory CD4 T-cell TFH nTPM: 81.8
Samples: 4
Max nTPM: 129.6
Min nTPM: 45.0
RHH5300_R3666
76.8
RHH5236_R3608
129.6
RHH5265_R3637
45.0
RHH5208_R3579
75.6
Memory CD4 T-cell Th1 nTPM: 145.8
Samples: 4
Max nTPM: 221.2
Min nTPM: 70.0
RHH5210_R3581
70.0
RHH5302_R3668
130.8
RHH5238_R3610
221.2
RHH5267_R3639
161.2
Memory CD4 T-cell Th1/Th17 nTPM: 142.0
Samples: 4
Max nTPM: 187.9
Min nTPM: 102.9
RHH5303_R3669
102.9
RHH5211_R3582
104.7
RHH5239_R3611
187.9
RHH5268_R3640
172.6
Memory CD4 T-cell Th17 nTPM: 133.0
Samples: 4
Max nTPM: 212.4
Min nTPM: 54.1
RHH5304_R3670
212.4
RHH5212_R3583
54.1
RHH5240_R3612
148.2
RHH5269_R3641
117.3
Memory CD4 T-cell Th2 nTPM: 124.2
Samples: 4
Max nTPM: 200.0
Min nTPM: 80.2
RHH5305_R3671
200.0
RHH5213_R3584
119.2
RHH5241_R3613
97.5
RHH5270_R3642
80.2
Naive CD4 T-cell nTPM: 119.9
Samples: 4
Max nTPM: 151.5
Min nTPM: 92.7
RHH5306_R3672
126.4
RHH5214_R3585
151.5
RHH5242_R3614
92.7
RHH5271_R3643
109.0
Naive CD8 T-cell nTPM: 104.9
Samples: 4
Max nTPM: 164.1
Min nTPM: 42.9
RHH5201_R3572
64.4
RHH5229_R3601
164.1
RHH5258_R3630
42.9
RHH5287_R3659
148.2
Non-Vd2 gdTCR nTPM: 132.3
Samples: 4
Max nTPM: 156.5
Min nTPM: 111.4
RHH5235_R3607
156.5
RHH5264_R3636
132.8
RHH5207_R3578
111.4
RHH5299_R3665
128.3
T-reg nTPM: 121.4
Samples: 4
Max nTPM: 134.8
Min nTPM: 108.1
RHH5301_R3667
132.9
RHH5237_R3609
108.1
RHH5266_R3638
134.8
RHH5209_R3580
109.6
Terminal effector memory CD4 T-cell nTPM: 89.1
Samples: 2
Max nTPM: 109.1
Min nTPM: 69.1
RHH5243_R3615
109.1
RHH5272_R3644
69.1
Terminal effector memory CD8 T-cell nTPM: 152.9
Samples: 4
Max nTPM: 234.7
Min nTPM: 53.9
RHH5232_R3604
53.9
RHH5204_R3575
198.2
RHH5261_R3633
234.7
RHH5296_R3662
124.7
Vd2 gdTCR nTPM: 176.9
Samples: 4
Max nTPM: 305.6
Min nTPM: 102.3
RHH5234_R3606
102.3
RHH5206_R3577
305.6
RHH5263_R3635
189.0
RHH5298_R3664
110.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
