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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
129.6
nTPM
Monaco:
361.5
nTPM
Schmiedel:
208.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.6
HPA sample
nTPM
gdT-cell nTPM: 107.0
Samples: 6
Max nTPM: 130.7
Min nTPM: 77.1
P10809_1007
77.1
P10809_1022
95.6
P10809_1041
130.7
P10809_1060
104.9
P10809_1077
109.0
P10809_1098
124.4
MAIT T-cell nTPM: 129.6
Samples: 6
Max nTPM: 160.5
Min nTPM: 98.3
P10809_1006
120.5
P10809_1024
100.0
P10809_1043
142.6
P10809_1062
155.7
P10809_1083
98.3
P10809_1097
160.5
Memory CD4 T-cell nTPM: 91.3
Samples: 6
Max nTPM: 110.4
Min nTPM: 70.7
P10809_1014
70.7
P10809_1026
85.3
P10809_1045
110.4
P10809_1064
103.0
P10809_1086
87.8
P10809_1113
90.7
Memory CD8 T-cell nTPM: 114.3
Samples: 5
Max nTPM: 138.2
Min nTPM: 80.7
P10809_1012
92.6
P10809_1027
80.7
P10809_1046
138.2
P10809_1065
138.0
P10809_1111
121.8
Naive CD4 T-cell nTPM: 21.7
Samples: 6
Max nTPM: 43.9
Min nTPM: 7.4
P10809_1015
12.1
P10809_1030
7.4
P10809_1049
11.5
P10809_1068
25.4
P10809_1085
43.9
P10809_1112
30.1
Naive CD8 T-cell nTPM: 67.9
Samples: 6
Max nTPM: 114.3
Min nTPM: 23.5
P10809_1016
23.5
P10809_1031
50.9
P10809_1050
71.8
P10809_1069
114.3
P10809_1087
90.1
P10809_1110
56.9
T-reg nTPM: 50.2
Samples: 6
Max nTPM: 95.1
Min nTPM: 31.0
P10809_1018
31.0
P10809_1037
39.7
P10809_1056
95.1
P10809_1075
45.3
P10809_1094
53.8
P10809_1106
36.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
361.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 245.3
Samples: 4
Max nTPM: 289.3
Min nTPM: 206.2
RHH5202_R3573
228.7
RHH5230_R3602
257.1
RHH5259_R3631
289.3
RHH5288_R3660
206.2
Effector memory CD8 T-cell nTPM: 265.2
Samples: 4
Max nTPM: 309.2
Min nTPM: 215.3
RHH5203_R3574
215.3
RHH5231_R3603
279.9
RHH5260_R3632
309.2
RHH5289_R3661
256.3
MAIT T-cell nTPM: 322.9
Samples: 4
Max nTPM: 413.7
Min nTPM: 240.3
RHH5233_R3605
240.3
RHH5205_R3576
365.3
RHH5262_R3634
413.7
RHH5297_R3663
272.1
Memory CD4 T-cell TFH nTPM: 138.0
Samples: 4
Max nTPM: 186.9
Min nTPM: 87.1
RHH5300_R3666
126.9
RHH5236_R3608
186.9
RHH5265_R3637
151.2
RHH5208_R3579
87.1
Memory CD4 T-cell Th1 nTPM: 211.8
Samples: 4
Max nTPM: 327.4
Min nTPM: 120.0
RHH5210_R3581
120.0
RHH5302_R3668
145.6
RHH5238_R3610
254.2
RHH5267_R3639
327.4
Memory CD4 T-cell Th1/Th17 nTPM: 361.5
Samples: 4
Max nTPM: 450.1
Min nTPM: 278.4
RHH5303_R3669
278.4
RHH5211_R3582
337.8
RHH5239_R3611
379.7
RHH5268_R3640
450.1
Memory CD4 T-cell Th17 nTPM: 267.8
Samples: 4
Max nTPM: 305.3
Min nTPM: 213.3
RHH5304_R3670
253.6
RHH5212_R3583
213.3
RHH5240_R3612
305.3
RHH5269_R3641
299.1
Memory CD4 T-cell Th2 nTPM: 312.3
Samples: 4
Max nTPM: 399.6
Min nTPM: 238.9
RHH5305_R3671
254.2
RHH5213_R3584
399.6
RHH5241_R3613
238.9
RHH5270_R3642
356.5
Naive CD4 T-cell nTPM: 46.6
Samples: 4
Max nTPM: 60.3
Min nTPM: 21.8
RHH5306_R3672
45.1
RHH5214_R3585
21.8
RHH5242_R3614
59.1
RHH5271_R3643
60.3
Naive CD8 T-cell nTPM: 78.6
Samples: 4
Max nTPM: 124.1
Min nTPM: 24.8
RHH5201_R3572
24.8
RHH5229_R3601
115.4
RHH5258_R3630
124.1
RHH5287_R3659
49.9
Non-Vd2 gdTCR nTPM: 330.5
Samples: 4
Max nTPM: 361.2
Min nTPM: 281.4
RHH5235_R3607
348.7
RHH5264_R3636
281.4
RHH5207_R3578
361.2
RHH5299_R3665
330.7
T-reg nTPM: 199.7
Samples: 4
Max nTPM: 256.4
Min nTPM: 117.1
RHH5301_R3667
117.1
RHH5237_R3609
226.3
RHH5266_R3638
256.4
RHH5209_R3580
199.1
Terminal effector memory CD4 T-cell nTPM: 355.2
Samples: 2
Max nTPM: 476.2
Min nTPM: 234.1
RHH5243_R3615
476.2
RHH5272_R3644
234.1
Terminal effector memory CD8 T-cell nTPM: 321.5
Samples: 4
Max nTPM: 434.0
Min nTPM: 269.8
RHH5232_R3604
294.2
RHH5204_R3575
269.8
RHH5261_R3633
434.0
RHH5296_R3662
288.0
Vd2 gdTCR nTPM: 171.8
Samples: 4
Max nTPM: 202.7
Min nTPM: 141.5
RHH5234_R3606
141.5
RHH5206_R3577
202.7
RHH5263_R3635
182.6
RHH5298_R3664
160.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
