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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.5
nTPM
Monaco:
104.4
nTPM
Schmiedel:
54.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.5
HPA sample
nTPM
gdT-cell nTPM: 54.8
Samples: 6
Max nTPM: 71.6
Min nTPM: 37.3
P10809_1007
46.0
P10809_1022
67.9
P10809_1041
71.6
P10809_1060
44.3
P10809_1077
61.7
P10809_1098
37.3
MAIT T-cell nTPM: 56.8
Samples: 6
Max nTPM: 72.1
Min nTPM: 44.6
P10809_1006
44.6
P10809_1024
72.1
P10809_1043
61.0
P10809_1062
48.6
P10809_1083
63.5
P10809_1097
50.7
Memory CD4 T-cell nTPM: 43.2
Samples: 6
Max nTPM: 55.8
Min nTPM: 38.3
P10809_1014
38.3
P10809_1026
55.8
P10809_1045
42.8
P10809_1064
39.1
P10809_1086
39.5
P10809_1113
43.9
Memory CD8 T-cell nTPM: 47.9
Samples: 5
Max nTPM: 55.2
Min nTPM: 41.7
P10809_1012
55.2
P10809_1027
54.1
P10809_1046
42.3
P10809_1065
41.7
P10809_1111
46.3
Naive CD4 T-cell nTPM: 37.2
Samples: 6
Max nTPM: 42.6
Min nTPM: 32.2
P10809_1015
32.2
P10809_1030
42.6
P10809_1049
36.9
P10809_1068
32.4
P10809_1085
41.9
P10809_1112
37.3
Naive CD8 T-cell nTPM: 40.1
Samples: 6
Max nTPM: 46.7
Min nTPM: 32.8
P10809_1016
39.7
P10809_1031
32.8
P10809_1050
46.7
P10809_1069
44.4
P10809_1087
42.8
P10809_1110
34.1
T-reg nTPM: 68.5
Samples: 6
Max nTPM: 84.9
Min nTPM: 51.2
P10809_1018
51.2
P10809_1037
67.9
P10809_1056
84.9
P10809_1075
52.1
P10809_1094
82.7
P10809_1106
72.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 55.9
Samples: 4
Max nTPM: 83.7
Min nTPM: 37.5
RHH5202_R3573
58.4
RHH5230_R3602
43.9
RHH5259_R3631
37.5
RHH5288_R3660
83.7
Effector memory CD8 T-cell nTPM: 88.1
Samples: 4
Max nTPM: 118.5
Min nTPM: 51.6
RHH5203_R3574
118.5
RHH5231_R3603
112.3
RHH5260_R3632
51.6
RHH5289_R3661
69.8
MAIT T-cell nTPM: 82.6
Samples: 4
Max nTPM: 95.1
Min nTPM: 63.0
RHH5233_R3605
93.6
RHH5205_R3576
63.0
RHH5262_R3634
78.6
RHH5297_R3663
95.1
Memory CD4 T-cell TFH nTPM: 69.2
Samples: 4
Max nTPM: 85.5
Min nTPM: 55.8
RHH5300_R3666
75.8
RHH5236_R3608
85.5
RHH5265_R3637
59.5
RHH5208_R3579
55.8
Memory CD4 T-cell Th1 nTPM: 53.2
Samples: 4
Max nTPM: 73.7
Min nTPM: 25.1
RHH5210_R3581
70.6
RHH5302_R3668
73.7
RHH5238_R3610
25.1
RHH5267_R3639
43.3
Memory CD4 T-cell Th1/Th17 nTPM: 64.4
Samples: 4
Max nTPM: 88.0
Min nTPM: 29.5
RHH5303_R3669
86.2
RHH5211_R3582
88.0
RHH5239_R3611
29.5
RHH5268_R3640
54.0
Memory CD4 T-cell Th17 nTPM: 57.4
Samples: 4
Max nTPM: 69.3
Min nTPM: 38.2
RHH5304_R3670
68.8
RHH5212_R3583
69.3
RHH5240_R3612
38.2
RHH5269_R3641
53.4
Memory CD4 T-cell Th2 nTPM: 71.8
Samples: 4
Max nTPM: 82.4
Min nTPM: 56.8
RHH5305_R3671
71.7
RHH5213_R3584
76.2
RHH5241_R3613
82.4
RHH5270_R3642
56.8
Naive CD4 T-cell nTPM: 64.8
Samples: 4
Max nTPM: 72.6
Min nTPM: 59.1
RHH5306_R3672
72.6
RHH5214_R3585
68.4
RHH5242_R3614
59.1
RHH5271_R3643
59.2
Naive CD8 T-cell nTPM: 46.9
Samples: 4
Max nTPM: 71.8
Min nTPM: 25.0
RHH5201_R3572
45.4
RHH5229_R3601
25.0
RHH5258_R3630
45.3
RHH5287_R3659
71.8
Non-Vd2 gdTCR nTPM: 104.4
Samples: 4
Max nTPM: 133.8
Min nTPM: 68.7
RHH5235_R3607
68.7
RHH5264_R3636
124.0
RHH5207_R3578
91.1
RHH5299_R3665
133.8
T-reg nTPM: 55.4
Samples: 4
Max nTPM: 74.1
Min nTPM: 28.4
RHH5301_R3667
73.4
RHH5237_R3609
74.1
RHH5266_R3638
45.6
RHH5209_R3580
28.4
Terminal effector memory CD4 T-cell nTPM: 75.6
Samples: 2
Max nTPM: 85.5
Min nTPM: 65.6
RHH5243_R3615
65.6
RHH5272_R3644
85.5
Terminal effector memory CD8 T-cell nTPM: 94.9
Samples: 4
Max nTPM: 119.1
Min nTPM: 83.3
RHH5232_R3604
83.3
RHH5204_R3575
119.1
RHH5261_R3633
84.8
RHH5296_R3662
92.3
Vd2 gdTCR nTPM: 82.5
Samples: 4
Max nTPM: 93.8
Min nTPM: 56.2
RHH5234_R3606
86.4
RHH5206_R3577
93.8
RHH5263_R3635
56.2
RHH5298_R3664
93.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
