HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:12.4 nTPM
HPA Brain:13.8 nTPM
GTEx:12.4 nTPM
FANTOM5:10.2 Scaled Tags Per Million
Pig:7.3 nTPM
Mouse:16.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005899Antibody HPA005914
Glial cells MediumLow
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.8
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
2621 Female, age 67, right hemisphere 12.8
2148 Female, age 91, left hemisphere 12.4
1911 Female, age 85, right hemisphere 12.2
1898 Male, age 80, left hemisphere 11.6
1855 Male, age 76, left hemisphere 10.2
2529 Female, age 94, left hemisphere 9.4
Dentate gyrus
nTPM: 10.9
1927 Female, age 91, both hemispheres 14.0
2246 Female, age 85, both hemispheres 11.1
2530 Female, age 94, left hemisphere 10.6
2531 Female, age 67, both hemispheres 10.3
2528 Male, age 74, both hemispheres 9.9
2010 Male, age 76, both hemispheres 9.6
Entorhinal gyrus
nTPM: 9.8
1938 Female, age 85, left hemisphere 11.8
2686 Male, age 75, right hemisphere 11.4
2764 Male, age 80, right hemisphere 11.4
2613 Female, age 94, left hemisphere 9.7
1787 Male, age 76, left hemisphere 9.3
2117 Female, age 91, right hemisphere 5.0
Hippocampus, CA1
nTPM: 12.6
2749 Male, age 80, left hemisphere 22.5
2082 Female, age 91, right hemisphere 13.1
2527 Male, age 74, both hemispheres 11.4
1873 Female, age 85, both hemispheres 8.6
2045 Male, age 76, both hemispheres 7.5
Hippocampus, CA2
nTPM: 12.2
1892 Male, age 76, both hemispheres 15.1
2249 Male, age 74, both hemispheres 13.7
1963 Male, age 80, left hemisphere 12.2
2437 Female, age 94, left hemisphere 12.2
2113 Female, age 91, right hemisphere 10.7
1940 Female, age 85, left hemisphere 9.4
Hippocampus, CA3
nTPM: 13.8
2137 Male, age 80, left hemisphere 18.5
1867 Male, age 76, both hemispheres 14.9
2436 Male, age 74, both hemispheres 14.9
1891 Female, age 85, both hemispheres 12.2
2620 Female, age 94, left hemisphere 11.2
2861 Female, age 67, both hemispheres 11.0
Parahippocampal cortex
nTPM: 11.7
2245 Female, age 91, both hemispheres 16.9
2622 Female, age 67, right hemisphere 13.8
2692 Male, age 74, both hemispheres 12.6
1990 Female, age 91, right hemisphere 12.1
1850 Male, age 80, both hemispheres 11.8
2250 Female, age 67, right hemisphere 10.9
1933 Female, age 85, both hemispheres 10.5
2693 Female, age 94, both hemispheres 10.5
2018 Male, age 76, both hemispheres 10.0
2532 Female, age 72, left hemisphere 8.2
Perirhinal gyrus
nTPM: 10.1
2521 Female, age 94, right hemisphere 11.9
1841 Female, age 85, right hemisphere 10.9
1847 Female, age 91, left hemisphere 10.7
1794 Male, age 80, right hemisphere 9.6
2848 Male, age 76, right hemisphere 7.6
Subiculum
nTPM: 12.0
1901 Male, age 80, both hemispheres 14.5
2729 Female, age 91, right hemisphere 14.3
2619 Male, age 74, both hemispheres 12.8
2042 Male, age 76, both hemispheres 12.6
1977 Female, age 85, both hemispheres 11.1
2438 Female, age 94, left hemisphere 6.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.4
Samples: 197

Max nTPM: 24.9
Min nTPM: 0.9
Std nTPM: 4.4
Median nTPM: 12.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 24.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 24.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 24.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 23.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 23.3
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 22.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 22.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 21.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 21.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 20.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.2
FF:10153-102I9 76 years, female 13.2
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.3
Pig sample Sample description nTPM
Subiculum
nTPM: 6.3
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.7
Sample A Female 7.5
Sample B Female 6.1
Sample C Male 5.7
Sample D Male 5.9
Dorsal hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 9.7
Min nTPM: 5.5
Sample A Female 9.7
Sample B Female 7.2
Sample C Male 6.8
Sample D Male 5.5
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.2
Sample A Female 7.5
Sample B Female 5.6
Sample C Male 6.4
Sample D Male 5.2
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 9.4
Min nTPM: 5.2
Sample A Female 7.5
Sample B Female 5.2
Sample C Male 9.4
Sample D Male 6.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.9
Min nTPM: 14.3
Sample A Male 14.3
Sample B Male 16.2
Sample C Female 16.9
Sample D Female 14.8
Hippocampal formation
nTPM: 16.4
Samples: 4

Max nTPM: 17.6
Min nTPM: 15.7
Sample A Male 15.7
Sample B Male 16.3
Sample C Female 16.0
Sample D Female 17.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
1379 Antisense, RP_Baylor_103379, Mouse strain C57BL/6J (56 days, male) 0.0
1380 Antisense, RP_Baylor_103379, Mouse strain C57BL/6J (56 days, male) 0.0

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