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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.0
nTPM
Monaco:
17.1
nTPM
Schmiedel:
9.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.0
HPA sample
nTPM
gdT-cell nTPM: 51.1
Samples: 6
Max nTPM: 85.9
Min nTPM: 35.6
P10809_1007
39.8
P10809_1022
52.4
P10809_1041
85.9
P10809_1060
41.9
P10809_1077
35.6
P10809_1098
50.9
MAIT T-cell nTPM: 40.8
Samples: 6
Max nTPM: 49.3
Min nTPM: 30.6
P10809_1006
30.6
P10809_1024
36.4
P10809_1043
49.3
P10809_1062
40.8
P10809_1083
45.0
P10809_1097
42.6
Memory CD4 T-cell nTPM: 56.4
Samples: 6
Max nTPM: 62.2
Min nTPM: 44.5
P10809_1014
44.5
P10809_1026
59.7
P10809_1045
59.9
P10809_1064
62.2
P10809_1086
51.4
P10809_1113
60.5
Memory CD8 T-cell nTPM: 48.2
Samples: 5
Max nTPM: 54.0
Min nTPM: 42.2
P10809_1012
42.2
P10809_1027
46.2
P10809_1046
54.0
P10809_1065
48.7
P10809_1111
50.0
Naive CD4 T-cell nTPM: 49.4
Samples: 6
Max nTPM: 66.6
Min nTPM: 30.7
P10809_1015
30.7
P10809_1030
53.3
P10809_1049
66.6
P10809_1068
44.2
P10809_1085
51.5
P10809_1112
50.2
Naive CD8 T-cell nTPM: 47.8
Samples: 6
Max nTPM: 64.0
Min nTPM: 33.7
P10809_1016
33.7
P10809_1031
64.0
P10809_1050
51.2
P10809_1069
45.1
P10809_1087
45.5
P10809_1110
47.3
T-reg nTPM: 96.0
Samples: 6
Max nTPM: 122.1
Min nTPM: 65.7
P10809_1018
65.7
P10809_1037
91.5
P10809_1056
122.1
P10809_1075
93.3
P10809_1094
109.3
P10809_1106
94.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 7.8
Samples: 4
Max nTPM: 12.9
Min nTPM: 2.5
RHH5202_R3573
3.3
RHH5230_R3602
12.9
RHH5259_R3631
12.4
RHH5288_R3660
2.5
Effector memory CD8 T-cell nTPM: 7.1
Samples: 4
Max nTPM: 10.6
Min nTPM: 0.9
RHH5203_R3574
10.6
RHH5231_R3603
0.9
RHH5260_R3632
7.2
RHH5289_R3661
9.5
MAIT T-cell nTPM: 7.5
Samples: 4
Max nTPM: 12.3
Min nTPM: 2.5
RHH5233_R3605
2.5
RHH5205_R3576
3.5
RHH5262_R3634
12.3
RHH5297_R3663
11.6
Memory CD4 T-cell TFH nTPM: 10.9
Samples: 4
Max nTPM: 19.3
Min nTPM: 3.1
RHH5300_R3666
12.8
RHH5236_R3608
19.3
RHH5265_R3637
8.4
RHH5208_R3579
3.1
Memory CD4 T-cell Th1 nTPM: 9.5
Samples: 4
Max nTPM: 16.5
Min nTPM: 1.9
RHH5210_R3581
1.9
RHH5302_R3668
12.0
RHH5238_R3610
16.5
RHH5267_R3639
7.4
Memory CD4 T-cell Th1/Th17 nTPM: 8.3
Samples: 4
Max nTPM: 15.6
Min nTPM: 1.5
RHH5303_R3669
1.5
RHH5211_R3582
6.1
RHH5239_R3611
9.9
RHH5268_R3640
15.6
Memory CD4 T-cell Th17 nTPM: 8.5
Samples: 4
Max nTPM: 11.7
Min nTPM: 3.5
RHH5304_R3670
11.4
RHH5212_R3583
7.4
RHH5240_R3612
11.7
RHH5269_R3641
3.5
Memory CD4 T-cell Th2 nTPM: 5.2
Samples: 4
Max nTPM: 8.2
Min nTPM: 0.4
RHH5305_R3671
8.2
RHH5213_R3584
4.0
RHH5241_R3613
8.1
RHH5270_R3642
0.4
Naive CD4 T-cell nTPM: 12.3
Samples: 4
Max nTPM: 20.0
Min nTPM: 5.1
RHH5306_R3672
13.3
RHH5214_R3585
5.1
RHH5242_R3614
20.0
RHH5271_R3643
10.7
Naive CD8 T-cell nTPM: 9.8
Samples: 4
Max nTPM: 15.5
Min nTPM: 4.9
RHH5201_R3572
4.9
RHH5229_R3601
13.3
RHH5258_R3630
5.5
RHH5287_R3659
15.5
Non-Vd2 gdTCR nTPM: 11.2
Samples: 4
Max nTPM: 18.8
Min nTPM: 2.8
RHH5235_R3607
13.2
RHH5264_R3636
10.1
RHH5207_R3578
2.8
RHH5299_R3665
18.8
T-reg nTPM: 9.1
Samples: 4
Max nTPM: 14.2
Min nTPM: 2.7
RHH5301_R3667
14.2
RHH5237_R3609
12.9
RHH5266_R3638
2.7
RHH5209_R3580
6.4
Terminal effector memory CD4 T-cell nTPM: 4.9
Samples: 2
Max nTPM: 9.3
Min nTPM: 0.4
RHH5243_R3615
0.4
RHH5272_R3644
9.3
Terminal effector memory CD8 T-cell nTPM: 13.0
Samples: 4
Max nTPM: 22.7
Min nTPM: 6.7
RHH5232_R3604
22.7
RHH5204_R3575
12.5
RHH5261_R3633
10.1
RHH5296_R3662
6.7
Vd2 gdTCR nTPM: 17.1
Samples: 4
Max nTPM: 24.1
Min nTPM: 12.2
RHH5234_R3606
14.0
RHH5206_R3577
24.1
RHH5263_R3635
12.2
RHH5298_R3664
18.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
