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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
208.1
nTPM
Monaco:
126.5
nTPM
Schmiedel:
60.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
208.1
HPA sample
nTPM
gdT-cell nTPM: 112.5
Samples: 6
Max nTPM: 138.2
Min nTPM: 91.1
P10809_1007
91.1
P10809_1022
125.0
P10809_1041
128.2
P10809_1060
97.7
P10809_1077
94.8
P10809_1098
138.2
MAIT T-cell nTPM: 134.0
Samples: 6
Max nTPM: 153.5
Min nTPM: 103.1
P10809_1006
122.7
P10809_1024
135.9
P10809_1043
140.1
P10809_1062
153.5
P10809_1083
103.1
P10809_1097
148.4
Memory CD4 T-cell nTPM: 160.1
Samples: 6
Max nTPM: 188.5
Min nTPM: 131.7
P10809_1014
153.3
P10809_1026
176.5
P10809_1045
147.8
P10809_1064
162.6
P10809_1086
131.7
P10809_1113
188.5
Memory CD8 T-cell nTPM: 139.8
Samples: 5
Max nTPM: 153.5
Min nTPM: 124.4
P10809_1012
153.5
P10809_1027
136.9
P10809_1046
147.9
P10809_1065
124.4
P10809_1111
136.1
Naive CD4 T-cell nTPM: 139.0
Samples: 6
Max nTPM: 162.1
Min nTPM: 101.7
P10809_1015
121.0
P10809_1030
139.6
P10809_1049
161.5
P10809_1068
148.0
P10809_1085
101.7
P10809_1112
162.1
Naive CD8 T-cell nTPM: 138.1
Samples: 6
Max nTPM: 164.3
Min nTPM: 108.6
P10809_1016
138.4
P10809_1031
133.7
P10809_1050
142.2
P10809_1069
141.4
P10809_1087
108.6
P10809_1110
164.3
T-reg nTPM: 208.1
Samples: 6
Max nTPM: 255.2
Min nTPM: 169.1
P10809_1018
172.5
P10809_1037
199.5
P10809_1056
255.2
P10809_1075
226.4
P10809_1094
169.1
P10809_1106
225.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
126.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 96.6
Samples: 4
Max nTPM: 142.5
Min nTPM: 60.8
RHH5202_R3573
98.7
RHH5230_R3602
84.2
RHH5259_R3631
60.8
RHH5288_R3660
142.5
Effector memory CD8 T-cell nTPM: 80.9
Samples: 4
Max nTPM: 94.8
Min nTPM: 56.7
RHH5203_R3574
94.8
RHH5231_R3603
94.4
RHH5260_R3632
56.7
RHH5289_R3661
77.8
MAIT T-cell nTPM: 97.0
Samples: 4
Max nTPM: 162.7
Min nTPM: 61.3
RHH5233_R3605
80.9
RHH5205_R3576
61.3
RHH5262_R3634
83.0
RHH5297_R3663
162.7
Memory CD4 T-cell TFH nTPM: 126.6
Samples: 4
Max nTPM: 165.5
Min nTPM: 88.3
RHH5300_R3666
143.7
RHH5236_R3608
165.5
RHH5265_R3637
108.7
RHH5208_R3579
88.3
Memory CD4 T-cell Th1 nTPM: 102.9
Samples: 4
Max nTPM: 205.4
Min nTPM: 57.0
RHH5210_R3581
87.3
RHH5302_R3668
205.4
RHH5238_R3610
61.7
RHH5267_R3639
57.0
Memory CD4 T-cell Th1/Th17 nTPM: 105.5
Samples: 4
Max nTPM: 165.5
Min nTPM: 46.0
RHH5303_R3669
165.5
RHH5211_R3582
137.4
RHH5239_R3611
46.0
RHH5268_R3640
72.9
Memory CD4 T-cell Th17 nTPM: 78.5
Samples: 4
Max nTPM: 113.0
Min nTPM: 40.7
RHH5304_R3670
97.9
RHH5212_R3583
113.0
RHH5240_R3612
40.7
RHH5269_R3641
62.4
Memory CD4 T-cell Th2 nTPM: 98.0
Samples: 4
Max nTPM: 105.8
Min nTPM: 89.3
RHH5305_R3671
95.5
RHH5213_R3584
101.3
RHH5241_R3613
105.8
RHH5270_R3642
89.3
Naive CD4 T-cell nTPM: 90.5
Samples: 4
Max nTPM: 139.0
Min nTPM: 59.9
RHH5306_R3672
92.1
RHH5214_R3585
139.0
RHH5242_R3614
71.1
RHH5271_R3643
59.9
Naive CD8 T-cell nTPM: 82.3
Samples: 4
Max nTPM: 124.3
Min nTPM: 45.0
RHH5201_R3572
69.9
RHH5229_R3601
45.0
RHH5258_R3630
124.3
RHH5287_R3659
89.9
Non-Vd2 gdTCR nTPM: 81.6
Samples: 4
Max nTPM: 112.1
Min nTPM: 50.8
RHH5235_R3607
50.8
RHH5264_R3636
102.9
RHH5207_R3578
60.6
RHH5299_R3665
112.1
T-reg nTPM: 110.9
Samples: 4
Max nTPM: 150.3
Min nTPM: 73.0
RHH5301_R3667
128.8
RHH5237_R3609
150.3
RHH5266_R3638
73.0
RHH5209_R3580
91.5
Terminal effector memory CD4 T-cell nTPM: 61.0
Samples: 2
Max nTPM: 89.1
Min nTPM: 32.9
RHH5243_R3615
32.9
RHH5272_R3644
89.1
Terminal effector memory CD8 T-cell nTPM: 94.6
Samples: 4
Max nTPM: 130.4
Min nTPM: 64.8
RHH5232_R3604
68.9
RHH5204_R3575
130.4
RHH5261_R3633
64.8
RHH5296_R3662
114.1
Vd2 gdTCR nTPM: 114.4
Samples: 4
Max nTPM: 165.0
Min nTPM: 55.4
RHH5234_R3606
90.6
RHH5206_R3577
146.7
RHH5263_R3635
55.4
RHH5298_R3664
165.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
