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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
13.1
nTPM
Monaco:
107.8
nTPM
Schmiedel:
74.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.1
HPA sample
nTPM
gdT-cell nTPM: 11.1
Samples: 6
Max nTPM: 12.9
Min nTPM: 8.5
P10809_1007
12.0
P10809_1022
12.3
P10809_1041
11.1
P10809_1060
12.9
P10809_1077
8.5
P10809_1098
9.9
MAIT T-cell nTPM: 12.9
Samples: 6
Max nTPM: 17.0
Min nTPM: 10.1
P10809_1006
17.0
P10809_1024
14.6
P10809_1043
12.7
P10809_1062
12.9
P10809_1083
10.2
P10809_1097
10.1
Memory CD4 T-cell nTPM: 12.1
Samples: 6
Max nTPM: 14.1
Min nTPM: 9.2
P10809_1014
12.3
P10809_1026
14.0
P10809_1045
11.3
P10809_1064
9.2
P10809_1086
14.1
P10809_1113
11.7
Memory CD8 T-cell nTPM: 12.1
Samples: 5
Max nTPM: 13.5
Min nTPM: 10.4
P10809_1012
12.8
P10809_1027
13.5
P10809_1046
11.3
P10809_1065
10.4
P10809_1111
12.4
Naive CD4 T-cell nTPM: 13.1
Samples: 6
Max nTPM: 16.3
Min nTPM: 11.5
P10809_1015
12.0
P10809_1030
15.0
P10809_1049
16.3
P10809_1068
11.5
P10809_1085
11.9
P10809_1112
11.9
Naive CD8 T-cell nTPM: 12.7
Samples: 6
Max nTPM: 14.3
Min nTPM: 10.2
P10809_1016
11.7
P10809_1031
10.2
P10809_1050
14.3
P10809_1069
13.1
P10809_1087
13.8
P10809_1110
12.9
T-reg nTPM: 10.2
Samples: 6
Max nTPM: 13.7
Min nTPM: 6.8
P10809_1018
11.9
P10809_1037
6.8
P10809_1056
12.0
P10809_1075
8.7
P10809_1094
8.0
P10809_1106
13.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 92.5
Samples: 4
Max nTPM: 99.6
Min nTPM: 85.8
RHH5202_R3573
89.0
RHH5230_R3602
99.6
RHH5259_R3631
95.4
RHH5288_R3660
85.8
Effector memory CD8 T-cell nTPM: 102.9
Samples: 4
Max nTPM: 111.5
Min nTPM: 84.5
RHH5203_R3574
84.5
RHH5231_R3603
105.9
RHH5260_R3632
109.7
RHH5289_R3661
111.5
MAIT T-cell nTPM: 88.3
Samples: 4
Max nTPM: 101.7
Min nTPM: 78.6
RHH5233_R3605
78.6
RHH5205_R3576
92.9
RHH5262_R3634
101.7
RHH5297_R3663
80.0
Memory CD4 T-cell TFH nTPM: 99.0
Samples: 4
Max nTPM: 116.6
Min nTPM: 75.3
RHH5300_R3666
75.3
RHH5236_R3608
108.3
RHH5265_R3637
95.9
RHH5208_R3579
116.6
Memory CD4 T-cell Th1 nTPM: 89.0
Samples: 4
Max nTPM: 123.9
Min nTPM: 67.5
RHH5210_R3581
67.5
RHH5302_R3668
82.4
RHH5238_R3610
123.9
RHH5267_R3639
82.0
Memory CD4 T-cell Th1/Th17 nTPM: 98.3
Samples: 4
Max nTPM: 116.6
Min nTPM: 82.6
RHH5303_R3669
89.8
RHH5211_R3582
104.3
RHH5239_R3611
116.6
RHH5268_R3640
82.6
Memory CD4 T-cell Th17 nTPM: 91.1
Samples: 4
Max nTPM: 100.2
Min nTPM: 79.5
RHH5304_R3670
79.5
RHH5212_R3583
94.1
RHH5240_R3612
100.2
RHH5269_R3641
90.6
Memory CD4 T-cell Th2 nTPM: 90.4
Samples: 4
Max nTPM: 104.6
Min nTPM: 84.9
RHH5305_R3671
85.4
RHH5213_R3584
104.6
RHH5241_R3613
84.9
RHH5270_R3642
86.8
Naive CD4 T-cell nTPM: 100.0
Samples: 4
Max nTPM: 110.6
Min nTPM: 86.9
RHH5306_R3672
86.9
RHH5214_R3585
99.7
RHH5242_R3614
102.6
RHH5271_R3643
110.6
Naive CD8 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 126.6
Min nTPM: 95.5
RHH5201_R3572
95.5
RHH5229_R3601
126.6
RHH5258_R3630
108.0
RHH5287_R3659
101.2
Non-Vd2 gdTCR nTPM: 95.6
Samples: 4
Max nTPM: 106.5
Min nTPM: 72.1
RHH5235_R3607
101.7
RHH5264_R3636
102.1
RHH5207_R3578
106.5
RHH5299_R3665
72.1
T-reg nTPM: 90.8
Samples: 4
Max nTPM: 111.8
Min nTPM: 80.9
RHH5301_R3667
80.9
RHH5237_R3609
111.8
RHH5266_R3638
83.4
RHH5209_R3580
87.2
Terminal effector memory CD4 T-cell nTPM: 98.4
Samples: 2
Max nTPM: 100.8
Min nTPM: 95.9
RHH5243_R3615
100.8
RHH5272_R3644
95.9
Terminal effector memory CD8 T-cell nTPM: 92.3
Samples: 4
Max nTPM: 110.0
Min nTPM: 73.2
RHH5232_R3604
110.0
RHH5204_R3575
73.2
RHH5261_R3633
98.1
RHH5296_R3662
88.0
Vd2 gdTCR nTPM: 97.1
Samples: 4
Max nTPM: 128.3
Min nTPM: 84.1
RHH5234_R3606
84.1
RHH5206_R3577
90.4
RHH5263_R3635
128.3
RHH5298_R3664
85.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
