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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
86.8
nTPM
Monaco:
179.4
nTPM
Schmiedel:
82.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.8
HPA sample
nTPM
gdT-cell nTPM: 86.9
Samples: 6
Max nTPM: 122.8
Min nTPM: 47.9
P10809_1007
47.9
P10809_1022
122.8
P10809_1041
119.5
P10809_1060
83.1
P10809_1077
73.4
P10809_1098
74.4
MAIT T-cell nTPM: 78.9
Samples: 6
Max nTPM: 107.3
Min nTPM: 41.2
P10809_1006
41.2
P10809_1024
99.9
P10809_1043
107.3
P10809_1062
87.9
P10809_1083
74.8
P10809_1097
62.1
Memory CD4 T-cell nTPM: 68.7
Samples: 6
Max nTPM: 81.8
Min nTPM: 38.9
P10809_1014
38.9
P10809_1026
79.6
P10809_1045
81.8
P10809_1064
67.1
P10809_1086
73.3
P10809_1113
71.6
Memory CD8 T-cell nTPM: 74.6
Samples: 5
Max nTPM: 107.6
Min nTPM: 41.7
P10809_1012
41.7
P10809_1027
82.2
P10809_1046
107.6
P10809_1065
77.0
P10809_1111
64.6
Naive CD4 T-cell nTPM: 48.3
Samples: 6
Max nTPM: 58.0
Min nTPM: 23.7
P10809_1015
23.7
P10809_1030
42.4
P10809_1049
55.8
P10809_1068
56.3
P10809_1085
58.0
P10809_1112
53.7
Naive CD8 T-cell nTPM: 55.0
Samples: 6
Max nTPM: 74.4
Min nTPM: 18.2
P10809_1016
18.2
P10809_1031
64.8
P10809_1050
49.8
P10809_1069
74.4
P10809_1087
69.4
P10809_1110
53.2
T-reg nTPM: 84.8
Samples: 6
Max nTPM: 136.6
Min nTPM: 48.6
P10809_1018
48.6
P10809_1037
78.8
P10809_1056
136.6
P10809_1075
68.0
P10809_1094
83.3
P10809_1106
93.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
179.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 106.3
Samples: 4
Max nTPM: 134.3
Min nTPM: 82.2
RHH5202_R3573
108.1
RHH5230_R3602
134.3
RHH5259_R3631
82.2
RHH5288_R3660
100.5
Effector memory CD8 T-cell nTPM: 179.4
Samples: 4
Max nTPM: 216.6
Min nTPM: 143.2
RHH5203_R3574
152.7
RHH5231_R3603
205.0
RHH5260_R3632
143.2
RHH5289_R3661
216.6
MAIT T-cell nTPM: 132.4
Samples: 4
Max nTPM: 148.7
Min nTPM: 110.1
RHH5233_R3605
148.7
RHH5205_R3576
124.1
RHH5262_R3634
146.8
RHH5297_R3663
110.1
Memory CD4 T-cell TFH nTPM: 85.0
Samples: 4
Max nTPM: 108.4
Min nTPM: 72.2
RHH5300_R3666
80.8
RHH5236_R3608
108.4
RHH5265_R3637
78.6
RHH5208_R3579
72.2
Memory CD4 T-cell Th1 nTPM: 81.9
Samples: 4
Max nTPM: 94.2
Min nTPM: 71.3
RHH5210_R3581
86.2
RHH5302_R3668
71.3
RHH5238_R3610
75.8
RHH5267_R3639
94.2
Memory CD4 T-cell Th1/Th17 nTPM: 108.8
Samples: 4
Max nTPM: 137.6
Min nTPM: 81.5
RHH5303_R3669
137.6
RHH5211_R3582
113.9
RHH5239_R3611
102.1
RHH5268_R3640
81.5
Memory CD4 T-cell Th17 nTPM: 121.5
Samples: 4
Max nTPM: 159.5
Min nTPM: 98.0
RHH5304_R3670
122.7
RHH5212_R3583
98.0
RHH5240_R3612
159.5
RHH5269_R3641
105.7
Memory CD4 T-cell Th2 nTPM: 104.5
Samples: 4
Max nTPM: 114.2
Min nTPM: 88.2
RHH5305_R3671
105.0
RHH5213_R3584
114.2
RHH5241_R3613
110.7
RHH5270_R3642
88.2
Naive CD4 T-cell nTPM: 73.9
Samples: 4
Max nTPM: 86.1
Min nTPM: 63.2
RHH5306_R3672
68.2
RHH5214_R3585
63.2
RHH5242_R3614
86.1
RHH5271_R3643
77.9
Naive CD8 T-cell nTPM: 62.3
Samples: 4
Max nTPM: 73.7
Min nTPM: 51.3
RHH5201_R3572
73.7
RHH5229_R3601
53.3
RHH5258_R3630
51.3
RHH5287_R3659
70.8
Non-Vd2 gdTCR nTPM: 158.6
Samples: 4
Max nTPM: 183.2
Min nTPM: 111.1
RHH5235_R3607
178.1
RHH5264_R3636
183.2
RHH5207_R3578
161.9
RHH5299_R3665
111.1
T-reg nTPM: 103.8
Samples: 4
Max nTPM: 145.3
Min nTPM: 71.4
RHH5301_R3667
71.4
RHH5237_R3609
145.3
RHH5266_R3638
105.7
RHH5209_R3580
92.8
Terminal effector memory CD4 T-cell nTPM: 170.2
Samples: 2
Max nTPM: 192.9
Min nTPM: 147.4
RHH5243_R3615
192.9
RHH5272_R3644
147.4
Terminal effector memory CD8 T-cell nTPM: 153.1
Samples: 4
Max nTPM: 182.3
Min nTPM: 134.3
RHH5232_R3604
182.3
RHH5204_R3575
134.3
RHH5261_R3633
156.3
RHH5296_R3662
139.4
Vd2 gdTCR nTPM: 142.7
Samples: 4
Max nTPM: 161.7
Min nTPM: 110.8
RHH5234_R3606
157.7
RHH5206_R3577
140.4
RHH5263_R3635
161.7
RHH5298_R3664
110.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
