HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:196.0 nTPM
HPA Brain:121.9 nTPM
GTEx:196.0 nTPM
FANTOM5:99.2 Scaled Tags Per Million
Pig:141.7 nTPM
Mouse:62.7 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041437
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 121.9
Sample id Sample description nTPM
Hippocampus
nTPM: 109.5
1898 Male, age 80, left hemisphere 133.5
2621 Female, age 67, right hemisphere 113.8
1855 Male, age 76, left hemisphere 110.5
2529 Female, age 94, left hemisphere 108.5
1911 Female, age 85, right hemisphere 99.8
2148 Female, age 91, left hemisphere 91.0
Dentate gyrus
nTPM: 109.0
2530 Female, age 94, left hemisphere 138.2
2010 Male, age 76, both hemispheres 120.6
1927 Female, age 91, both hemispheres 114.8
2246 Female, age 85, both hemispheres 107.2
2531 Female, age 67, both hemispheres 93.9
2528 Male, age 74, both hemispheres 79.1
Entorhinal gyrus
nTPM: 105.8
1938 Female, age 85, left hemisphere 118.1
1787 Male, age 76, left hemisphere 115.1
2764 Male, age 80, right hemisphere 110.3
2686 Male, age 75, right hemisphere 103.0
2613 Female, age 94, left hemisphere 98.9
2117 Female, age 91, right hemisphere 89.8
Hippocampus, CA1
nTPM: 114.9
2749 Male, age 80, left hemisphere 144.6
2045 Male, age 76, both hemispheres 117.8
1873 Female, age 85, both hemispheres 114.6
2527 Male, age 74, both hemispheres 100.5
2082 Female, age 91, right hemisphere 97.3
Hippocampus, CA2
nTPM: 109.5
1892 Male, age 76, both hemispheres 144.6
1963 Male, age 80, left hemisphere 118.8
2437 Female, age 94, left hemisphere 108.6
1940 Female, age 85, left hemisphere 100.5
2249 Male, age 74, both hemispheres 100.0
2113 Female, age 91, right hemisphere 84.9
Hippocampus, CA3
nTPM: 107.4
1867 Male, age 76, both hemispheres 125.5
2137 Male, age 80, left hemisphere 112.1
2436 Male, age 74, both hemispheres 108.3
1891 Female, age 85, both hemispheres 101.4
2861 Female, age 67, both hemispheres 98.6
2620 Female, age 94, left hemisphere 98.4
Parahippocampal cortex
nTPM: 103.8
1850 Male, age 80, both hemispheres 123.3
2018 Male, age 76, both hemispheres 117.8
1933 Female, age 85, both hemispheres 117.1
2245 Female, age 91, both hemispheres 114.7
2250 Female, age 67, right hemisphere 110.7
2532 Female, age 72, left hemisphere 99.9
1990 Female, age 91, right hemisphere 97.2
2692 Male, age 74, both hemispheres 86.7
2622 Female, age 67, right hemisphere 86.4
2693 Female, age 94, both hemispheres 84.3
Perirhinal gyrus
nTPM: 121.9
1847 Female, age 91, left hemisphere 155.2
1794 Male, age 80, right hemisphere 135.1
1841 Female, age 85, right hemisphere 122.8
2848 Male, age 76, right hemisphere 99.0
2521 Female, age 94, right hemisphere 97.4
Subiculum
nTPM: 102.1
1901 Male, age 80, both hemispheres 113.7
1977 Female, age 85, both hemispheres 112.5
2042 Male, age 76, both hemispheres 111.6
2619 Male, age 74, both hemispheres 98.8
2438 Female, age 94, left hemisphere 97.8
2729 Female, age 91, right hemisphere 78.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 196.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 196.0
Samples: 197

Max nTPM: 528.4
Min nTPM: 96.7
Std nTPM: 58.6
Median nTPM: 186.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 528.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 420.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 392.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 345.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 341.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 338.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 321.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 318.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 315.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 307.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 295.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.2
FF:10169-103B7 60 years, female 112.1
FF:10153-102I9 76 years, female 86.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 141.7
Pig sample Sample description nTPM
Subiculum
nTPM: 98.4
Samples: 4

Max nTPM: 138.1
Min nTPM: 77.9
Sample A Female 138.1
Sample B Female 92.7
Sample C Male 84.9
Sample D Male 77.9
Dorsal hippocampus
nTPM: 141.7
Samples: 4

Max nTPM: 213.5
Min nTPM: 99.2
Sample A Female 213.5
Sample B Female 116.0
Sample C Male 138.0
Sample D Male 99.2
Entorhinal cortex
nTPM: 94.5
Samples: 4

Max nTPM: 111.5
Min nTPM: 64.7
Sample A Female 92.8
Sample B Female 109.1
Sample C Male 111.5
Sample D Male 64.7
Ventral hippocampus
nTPM: 119.8
Samples: 4

Max nTPM: 143.7
Min nTPM: 88.9
Sample A Female 124.6
Sample B Female 88.9
Sample C Male 143.7
Sample D Male 122.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.3
Samples: 4

Max nTPM: 66.8
Min nTPM: 54.3
Sample A Male 54.3
Sample B Male 59.5
Sample C Female 66.8
Sample D Female 56.6
Hippocampal formation
nTPM: 62.7
Samples: 4

Max nTPM: 68.8
Min nTPM: 56.3
Sample A Male 68.8
Sample B Male 56.3
Sample C Female 60.4
Sample D Female 65.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
68744002 Antisense, RP_050203_02_A05, Mouse strain C57BL/6J (56 days, male) 3.5

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