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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
117.1
nTPM
GTEx:
117.1
nTPM
FANTOM5:
41.5
Scaled Tags Per Million
Pig:
41.2
nTPM
Mouse:
67.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
117.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 117.1
Samples: 105
Max nTPM: 168.9
Min nTPM: 37.8
Std nTPM: 26.4
Median nTPM:
218_1
71 years, female
168.9
452_1
88 years, female
164.9
319_1
81 years, male
161.5
321_1
62 years, female
161.2
384_1
83 years, male
160.5
177_1
74 years, male
159.7
377_1
82 years, female
154.4
355_1
70 years, female
153.8
163_1
78 years, male
152.4
322_1
76 years, male
150.8
237_1
82 years, male
146.8
243_1
75 years, male
143.1
379_1
60 years, male
142.7
404_1
82 years, female
142.5
317_1
60 years, male
142.3
386_1
76 years, male
141.8
173_1
67 years, male
141.6
320_1
89 years, female
141.6
405_1
91 years, male
141.1
17_1
71 years, male
140.4
394_1
75 years, female
139.6
189_1
76 years, male
138.1
356_1
87 years, female
137.7
99_1
64 years, male
136.6
351_1
91 years, male
136.3
376_1
75 years, female
135.9
246_1
77 years, male
134.9
35_1
74 years, female
134.8
41_1
94 years, female
134.7
447_1
81 years, male
133.3
153_1
70 years, female
132.6
506_1
65 years, male
132.3
354_1
81 years, female
132.2
4_1
88 years, female
131.4
229_1
69 years, female
131.0
251_1
78 years, male
130.9
352_1
62 years, male
130.6
318_1
68 years, male
130.0
349_1
83 years, male
129.8
389_1
86 years, female
127.4
316_1
62 years, male
127.2
2_1
77 years, female
126.8
406_1
79 years, male
126.5
295_1
61 years, female
126.4
425_1
59 years, female
124.9
265_1
87 years, male
124.8
120_1
70 years, female
123.6
353_1
82 years, female
123.3
396_1
62 years, male
123.3
172_1
72 years, female
122.7
350_1
84 years, female
122.7
503_1
68 years, male
121.9
115_1
83 years, male
120.9
254_1
77 years, female
119.3
375_1
74 years, female
119.2
347_1
72 years, male
119.0
264_1
73 years, female
118.5
291_1
76 years, male
117.4
335_1
73 years, female
117.3
6_1
73 years, female
116.1
315_1
62 years, female
116.0
286_1
68 years, female
115.4
480_1
63 years, male
115.2
137_1
83 years, male
114.2
293_1
68 years, female
113.3
145_1
84 years, male
112.2
217_1
76 years, male
110.7
311_1
78 years, male
109.5
266_1
85 years, male
108.9
348_1
84 years, male
108.8
308_1
70 years, female
108.1
526_1
61 years, male
107.9
517_1
88 years, male
106.5
307_1
66 years, female
106.4
292_1
71 years, male
105.4
313_1
79 years, female
104.1
18_1
88 years, male
103.7
9_1
66 years, female
101.4
324_1
76 years, male
99.6
126_1
63 years, male
99.5
109_1
81 years, female
98.1
139_1
64 years, female
98.1
42_1
85 years, male
97.8
499_1
55 years, female
95.5
119_1
70 years, female
94.8
518_1
75 years, female
94.5
468_1
89 years, male
94.4
117_1
61 years, male
93.1
314_1
67 years, male
91.5
142_1
61 years, female
89.8
81_1
67 years, male
89.4
414_1
84 years, female
86.8
288_1
66 years, female
86.2
162_1
79 years, female
81.1
89_1
63 years, male
78.8
415_1
77 years, female
77.1
495_1
57 years, female
77.1
466_1
57 years, female
71.4
32_1
67 years, male
70.8
501_1
88 years, male
67.8
43_1
64 years, female
67.7
149_1
88 years, male
61.3
413_1
59 years, female
60.3
490_1
67 years, female
41.0
491_1
89 years, female
37.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
