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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1249.0
nTPM
Monaco:
199.5
nTPM
Schmiedel:
359.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1249.0
HPA sample
nTPM
gdT-cell nTPM: 812.7
Samples: 6
Max nTPM: 1029.4
Min nTPM: 628.7
P10809_1007
794.6
P10809_1022
850.7
P10809_1041
1029.4
P10809_1060
628.7
P10809_1077
801.5
P10809_1098
771.3
MAIT T-cell nTPM: 1048.1
Samples: 6
Max nTPM: 1300.6
Min nTPM: 781.0
P10809_1006
781.0
P10809_1024
1254.1
P10809_1043
1300.6
P10809_1062
1001.1
P10809_1083
918.4
P10809_1097
1033.6
Memory CD4 T-cell nTPM: 1080.1
Samples: 6
Max nTPM: 1334.4
Min nTPM: 949.4
P10809_1014
1021.3
P10809_1026
1334.4
P10809_1045
1165.0
P10809_1064
1014.7
P10809_1086
995.7
P10809_1113
949.4
Memory CD8 T-cell nTPM: 965.0
Samples: 5
Max nTPM: 1123.7
Min nTPM: 805.6
P10809_1012
805.6
P10809_1027
1123.7
P10809_1046
1080.4
P10809_1065
960.8
P10809_1111
854.3
Naive CD4 T-cell nTPM: 1249.0
Samples: 6
Max nTPM: 1749.5
Min nTPM: 1001.6
P10809_1015
1013.4
P10809_1030
1514.7
P10809_1049
1749.5
P10809_1068
1087.3
P10809_1085
1127.4
P10809_1112
1001.6
Naive CD8 T-cell nTPM: 1087.4
Samples: 6
Max nTPM: 1272.4
Min nTPM: 858.4
P10809_1016
1259.0
P10809_1031
1272.4
P10809_1050
1155.9
P10809_1069
1082.7
P10809_1087
858.4
P10809_1110
896.2
T-reg nTPM: 1148.5
Samples: 6
Max nTPM: 1699.4
Min nTPM: 843.9
P10809_1018
843.9
P10809_1037
1176.6
P10809_1056
1699.4
P10809_1075
1020.1
P10809_1094
1151.7
P10809_1106
999.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
199.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.4
Samples: 4
Max nTPM: 234.5
Min nTPM: 87.7
RHH5202_R3573
87.7
RHH5230_R3602
145.9
RHH5259_R3631
234.5
RHH5288_R3660
117.3
Effector memory CD8 T-cell nTPM: 108.5
Samples: 4
Max nTPM: 158.7
Min nTPM: 71.5
RHH5203_R3574
109.6
RHH5231_R3603
94.0
RHH5260_R3632
158.7
RHH5289_R3661
71.5
MAIT T-cell nTPM: 132.6
Samples: 4
Max nTPM: 166.9
Min nTPM: 95.1
RHH5233_R3605
95.1
RHH5205_R3576
166.9
RHH5262_R3634
154.6
RHH5297_R3663
113.7
Memory CD4 T-cell TFH nTPM: 118.6
Samples: 4
Max nTPM: 192.3
Min nTPM: 74.4
RHH5300_R3666
115.3
RHH5236_R3608
192.3
RHH5265_R3637
74.4
RHH5208_R3579
92.5
Memory CD4 T-cell Th1 nTPM: 173.9
Samples: 4
Max nTPM: 269.9
Min nTPM: 78.4
RHH5210_R3581
78.4
RHH5302_R3668
165.8
RHH5238_R3610
269.9
RHH5267_R3639
181.3
Memory CD4 T-cell Th1/Th17 nTPM: 155.5
Samples: 4
Max nTPM: 223.1
Min nTPM: 112.2
RHH5303_R3669
121.3
RHH5211_R3582
112.2
RHH5239_R3611
165.2
RHH5268_R3640
223.1
Memory CD4 T-cell Th17 nTPM: 156.3
Samples: 4
Max nTPM: 211.5
Min nTPM: 100.5
RHH5304_R3670
211.5
RHH5212_R3583
100.5
RHH5240_R3612
158.5
RHH5269_R3641
154.6
Memory CD4 T-cell Th2 nTPM: 155.5
Samples: 4
Max nTPM: 246.6
Min nTPM: 115.8
RHH5305_R3671
246.6
RHH5213_R3584
115.8
RHH5241_R3613
119.5
RHH5270_R3642
140.2
Naive CD4 T-cell nTPM: 199.6
Samples: 4
Max nTPM: 279.9
Min nTPM: 104.6
RHH5306_R3672
226.9
RHH5214_R3585
279.9
RHH5242_R3614
104.6
RHH5271_R3643
186.8
Naive CD8 T-cell nTPM: 158.6
Samples: 4
Max nTPM: 226.0
Min nTPM: 100.4
RHH5201_R3572
100.4
RHH5229_R3601
226.0
RHH5258_R3630
106.4
RHH5287_R3659
201.6
Non-Vd2 gdTCR nTPM: 105.9
Samples: 4
Max nTPM: 153.0
Min nTPM: 86.4
RHH5235_R3607
153.0
RHH5264_R3636
86.4
RHH5207_R3578
94.5
RHH5299_R3665
89.8
T-reg nTPM: 156.2
Samples: 4
Max nTPM: 174.6
Min nTPM: 139.7
RHH5301_R3667
139.7
RHH5237_R3609
140.9
RHH5266_R3638
169.4
RHH5209_R3580
174.6
Terminal effector memory CD4 T-cell nTPM: 103.0
Samples: 2
Max nTPM: 123.8
Min nTPM: 82.1
RHH5243_R3615
123.8
RHH5272_R3644
82.1
Terminal effector memory CD8 T-cell nTPM: 154.6
Samples: 4
Max nTPM: 231.2
Min nTPM: 60.8
RHH5232_R3604
60.8
RHH5204_R3575
227.4
RHH5261_R3633
231.2
RHH5296_R3662
99.0
Vd2 gdTCR nTPM: 198.1
Samples: 4
Max nTPM: 326.2
Min nTPM: 119.7
RHH5234_R3606
119.7
RHH5206_R3577
326.2
RHH5263_R3635
208.9
RHH5298_R3664
137.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
