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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
81.9
nTPM
Monaco:
112.1
nTPM
Schmiedel:
99.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.9
HPA sample
nTPM
gdT-cell nTPM: 50.0
Samples: 6
Max nTPM: 61.8
Min nTPM: 28.3
P10809_1007
28.3
P10809_1022
61.8
P10809_1041
54.9
P10809_1060
47.3
P10809_1077
55.2
P10809_1098
52.4
MAIT T-cell nTPM: 58.0
Samples: 6
Max nTPM: 67.3
Min nTPM: 43.4
P10809_1006
43.4
P10809_1024
67.3
P10809_1043
63.5
P10809_1062
64.9
P10809_1083
47.0
P10809_1097
61.6
Memory CD4 T-cell nTPM: 66.5
Samples: 6
Max nTPM: 89.1
Min nTPM: 48.3
P10809_1014
48.3
P10809_1026
89.1
P10809_1045
70.4
P10809_1064
69.0
P10809_1086
56.5
P10809_1113
65.4
Memory CD8 T-cell nTPM: 54.5
Samples: 5
Max nTPM: 60.3
Min nTPM: 46.6
P10809_1012
46.6
P10809_1027
52.4
P10809_1046
60.3
P10809_1065
54.9
P10809_1111
58.1
Naive CD4 T-cell nTPM: 59.9
Samples: 6
Max nTPM: 75.4
Min nTPM: 41.9
P10809_1015
41.9
P10809_1030
55.2
P10809_1049
68.1
P10809_1068
75.4
P10809_1085
54.2
P10809_1112
64.6
Naive CD8 T-cell nTPM: 53.0
Samples: 6
Max nTPM: 75.7
Min nTPM: 44.0
P10809_1016
44.0
P10809_1031
50.5
P10809_1050
46.7
P10809_1069
75.7
P10809_1087
54.1
P10809_1110
47.1
T-reg nTPM: 81.9
Samples: 6
Max nTPM: 116.7
Min nTPM: 54.7
P10809_1018
54.7
P10809_1037
66.3
P10809_1056
116.7
P10809_1075
83.6
P10809_1094
87.0
P10809_1106
83.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
112.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.8
Samples: 4
Max nTPM: 99.1
Min nTPM: 63.6
RHH5202_R3573
99.1
RHH5230_R3602
85.5
RHH5259_R3631
63.6
RHH5288_R3660
91.0
Effector memory CD8 T-cell nTPM: 81.8
Samples: 4
Max nTPM: 113.8
Min nTPM: 64.5
RHH5203_R3574
113.8
RHH5231_R3603
83.9
RHH5260_R3632
65.0
RHH5289_R3661
64.5
MAIT T-cell nTPM: 100.4
Samples: 4
Max nTPM: 141.3
Min nTPM: 69.2
RHH5233_R3605
103.4
RHH5205_R3576
87.6
RHH5262_R3634
69.2
RHH5297_R3663
141.3
Memory CD4 T-cell TFH nTPM: 100.8
Samples: 4
Max nTPM: 137.9
Min nTPM: 63.6
RHH5300_R3666
137.9
RHH5236_R3608
87.9
RHH5265_R3637
63.6
RHH5208_R3579
113.8
Memory CD4 T-cell Th1 nTPM: 91.9
Samples: 4
Max nTPM: 121.8
Min nTPM: 70.6
RHH5210_R3581
121.8
RHH5302_R3668
101.6
RHH5238_R3610
70.6
RHH5267_R3639
73.6
Memory CD4 T-cell Th1/Th17 nTPM: 100.7
Samples: 4
Max nTPM: 131.2
Min nTPM: 65.8
RHH5303_R3669
116.2
RHH5211_R3582
131.2
RHH5239_R3611
89.6
RHH5268_R3640
65.8
Memory CD4 T-cell Th17 nTPM: 86.1
Samples: 4
Max nTPM: 103.5
Min nTPM: 69.9
RHH5304_R3670
96.4
RHH5212_R3583
103.5
RHH5240_R3612
69.9
RHH5269_R3641
74.6
Memory CD4 T-cell Th2 nTPM: 95.6
Samples: 4
Max nTPM: 102.1
Min nTPM: 90.3
RHH5305_R3671
97.3
RHH5213_R3584
92.8
RHH5241_R3613
102.1
RHH5270_R3642
90.3
Naive CD4 T-cell nTPM: 94.9
Samples: 4
Max nTPM: 117.5
Min nTPM: 73.8
RHH5306_R3672
117.5
RHH5214_R3585
97.0
RHH5242_R3614
91.3
RHH5271_R3643
73.8
Naive CD8 T-cell nTPM: 79.3
Samples: 4
Max nTPM: 117.3
Min nTPM: 53.7
RHH5201_R3572
117.3
RHH5229_R3601
53.7
RHH5258_R3630
70.2
RHH5287_R3659
75.8
Non-Vd2 gdTCR nTPM: 108.1
Samples: 4
Max nTPM: 139.8
Min nTPM: 83.4
RHH5235_R3607
83.4
RHH5264_R3636
104.9
RHH5207_R3578
104.4
RHH5299_R3665
139.8
T-reg nTPM: 77.9
Samples: 4
Max nTPM: 97.3
Min nTPM: 67.6
RHH5301_R3667
71.3
RHH5237_R3609
97.3
RHH5266_R3638
75.3
RHH5209_R3580
67.6
Terminal effector memory CD4 T-cell nTPM: 80.5
Samples: 2
Max nTPM: 101.5
Min nTPM: 59.5
RHH5243_R3615
59.5
RHH5272_R3644
101.5
Terminal effector memory CD8 T-cell nTPM: 112.1
Samples: 4
Max nTPM: 138.4
Min nTPM: 76.8
RHH5232_R3604
138.4
RHH5204_R3575
101.7
RHH5261_R3633
76.8
RHH5296_R3662
131.3
Vd2 gdTCR nTPM: 82.4
Samples: 4
Max nTPM: 108.2
Min nTPM: 68.5
RHH5234_R3606
79.0
RHH5206_R3577
74.0
RHH5263_R3635
68.5
RHH5298_R3664
108.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
