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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
88.9
nTPM
Monaco:
137.4
nTPM
Schmiedel:
109.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.9
HPA sample
nTPM
gdT-cell nTPM: 78.3
Samples: 6
Max nTPM: 92.6
Min nTPM: 59.6
P10809_1007
59.6
P10809_1022
92.6
P10809_1041
92.2
P10809_1060
74.4
P10809_1077
70.9
P10809_1098
80.2
MAIT T-cell nTPM: 58.7
Samples: 6
Max nTPM: 80.1
Min nTPM: 42.7
P10809_1006
47.5
P10809_1024
42.7
P10809_1043
80.1
P10809_1062
62.0
P10809_1083
61.3
P10809_1097
58.8
Memory CD4 T-cell nTPM: 64.3
Samples: 6
Max nTPM: 75.9
Min nTPM: 56.9
P10809_1014
56.9
P10809_1026
62.8
P10809_1045
67.0
P10809_1064
75.9
P10809_1086
65.2
P10809_1113
57.8
Memory CD8 T-cell nTPM: 80.8
Samples: 5
Max nTPM: 90.0
Min nTPM: 70.8
P10809_1012
70.8
P10809_1027
81.2
P10809_1046
90.0
P10809_1065
76.8
P10809_1111
85.3
Naive CD4 T-cell nTPM: 56.1
Samples: 6
Max nTPM: 67.0
Min nTPM: 37.6
P10809_1015
49.2
P10809_1030
37.6
P10809_1049
60.4
P10809_1068
61.5
P10809_1085
67.0
P10809_1112
61.1
Naive CD8 T-cell nTPM: 64.2
Samples: 6
Max nTPM: 85.0
Min nTPM: 44.9
P10809_1016
44.9
P10809_1031
76.7
P10809_1050
69.7
P10809_1069
58.9
P10809_1087
85.0
P10809_1110
49.8
T-reg nTPM: 88.9
Samples: 6
Max nTPM: 98.6
Min nTPM: 75.2
P10809_1018
75.2
P10809_1037
83.9
P10809_1056
85.6
P10809_1075
94.8
P10809_1094
95.5
P10809_1106
98.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 105.2
Samples: 4
Max nTPM: 124.4
Min nTPM: 69.8
RHH5202_R3573
69.8
RHH5230_R3602
123.4
RHH5259_R3631
103.1
RHH5288_R3660
124.4
Effector memory CD8 T-cell nTPM: 112.4
Samples: 4
Max nTPM: 139.9
Min nTPM: 74.1
RHH5203_R3574
126.2
RHH5231_R3603
109.4
RHH5260_R3632
139.9
RHH5289_R3661
74.1
MAIT T-cell nTPM: 118.0
Samples: 4
Max nTPM: 129.6
Min nTPM: 103.1
RHH5233_R3605
103.1
RHH5205_R3576
118.8
RHH5262_R3634
129.6
RHH5297_R3663
120.5
Memory CD4 T-cell TFH nTPM: 98.1
Samples: 4
Max nTPM: 116.5
Min nTPM: 66.2
RHH5300_R3666
116.5
RHH5236_R3608
115.0
RHH5265_R3637
94.5
RHH5208_R3579
66.2
Memory CD4 T-cell Th1 nTPM: 110.6
Samples: 4
Max nTPM: 119.1
Min nTPM: 93.9
RHH5210_R3581
115.6
RHH5302_R3668
119.1
RHH5238_R3610
113.9
RHH5267_R3639
93.9
Memory CD4 T-cell Th1/Th17 nTPM: 112.8
Samples: 4
Max nTPM: 128.9
Min nTPM: 76.5
RHH5303_R3669
76.5
RHH5211_R3582
128.9
RHH5239_R3611
124.9
RHH5268_R3640
120.7
Memory CD4 T-cell Th17 nTPM: 93.0
Samples: 4
Max nTPM: 112.4
Min nTPM: 77.6
RHH5304_R3670
77.6
RHH5212_R3583
112.4
RHH5240_R3612
98.0
RHH5269_R3641
84.1
Memory CD4 T-cell Th2 nTPM: 108.3
Samples: 4
Max nTPM: 129.0
Min nTPM: 87.7
RHH5305_R3671
129.0
RHH5213_R3584
118.2
RHH5241_R3613
87.7
RHH5270_R3642
98.2
Naive CD4 T-cell nTPM: 104.5
Samples: 4
Max nTPM: 119.3
Min nTPM: 90.4
RHH5306_R3672
119.3
RHH5214_R3585
102.1
RHH5242_R3614
90.4
RHH5271_R3643
106.2
Naive CD8 T-cell nTPM: 66.0
Samples: 4
Max nTPM: 92.2
Min nTPM: 39.4
RHH5201_R3572
39.4
RHH5229_R3601
68.3
RHH5258_R3630
92.2
RHH5287_R3659
64.2
Non-Vd2 gdTCR nTPM: 132.5
Samples: 4
Max nTPM: 161.7
Min nTPM: 111.0
RHH5235_R3607
122.1
RHH5264_R3636
135.0
RHH5207_R3578
111.0
RHH5299_R3665
161.7
T-reg nTPM: 100.8
Samples: 4
Max nTPM: 123.4
Min nTPM: 74.7
RHH5301_R3667
123.4
RHH5237_R3609
118.9
RHH5266_R3638
86.0
RHH5209_R3580
74.7
Terminal effector memory CD4 T-cell nTPM: 109.1
Samples: 2
Max nTPM: 109.4
Min nTPM: 108.7
RHH5243_R3615
109.4
RHH5272_R3644
108.7
Terminal effector memory CD8 T-cell nTPM: 134.1
Samples: 4
Max nTPM: 172.9
Min nTPM: 93.9
RHH5232_R3604
143.5
RHH5204_R3575
172.9
RHH5261_R3633
126.2
RHH5296_R3662
93.9
Vd2 gdTCR nTPM: 137.4
Samples: 4
Max nTPM: 141.4
Min nTPM: 134.7
RHH5234_R3606
134.7
RHH5206_R3577
134.8
RHH5263_R3635
138.7
RHH5298_R3664
141.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
