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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
55.8
nTPM
Monaco:
92.5
nTPM
Schmiedel:
100.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.8
HPA sample
nTPM
gdT-cell nTPM: 39.1
Samples: 6
Max nTPM: 54.1
Min nTPM: 13.2
P10809_1007
31.0
P10809_1022
38.4
P10809_1041
54.1
P10809_1060
13.2
P10809_1077
51.5
P10809_1098
46.3
MAIT T-cell nTPM: 37.9
Samples: 6
Max nTPM: 55.1
Min nTPM: 24.0
P10809_1006
34.0
P10809_1024
24.0
P10809_1043
55.1
P10809_1062
24.5
P10809_1083
47.6
P10809_1097
42.4
Memory CD4 T-cell nTPM: 39.2
Samples: 6
Max nTPM: 68.8
Min nTPM: 9.4
P10809_1014
30.2
P10809_1026
35.2
P10809_1045
63.1
P10809_1064
68.8
P10809_1086
28.4
P10809_1113
9.4
Memory CD8 T-cell nTPM: 55.8
Samples: 5
Max nTPM: 74.3
Min nTPM: 23.4
P10809_1012
41.9
P10809_1027
23.4
P10809_1046
73.0
P10809_1065
74.3
P10809_1111
66.3
Naive CD4 T-cell nTPM: 23.5
Samples: 6
Max nTPM: 36.7
Min nTPM: 14.1
P10809_1015
16.4
P10809_1030
14.1
P10809_1049
26.0
P10809_1068
29.2
P10809_1085
36.7
P10809_1112
18.3
Naive CD8 T-cell nTPM: 32.1
Samples: 6
Max nTPM: 45.5
Min nTPM: 13.1
P10809_1016
16.3
P10809_1031
35.5
P10809_1050
41.4
P10809_1069
45.5
P10809_1087
13.1
P10809_1110
40.9
T-reg nTPM: 55.2
Samples: 6
Max nTPM: 83.0
Min nTPM: 23.6
P10809_1018
39.0
P10809_1037
67.1
P10809_1056
83.0
P10809_1075
52.8
P10809_1094
23.6
P10809_1106
65.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.5
Samples: 4
Max nTPM: 66.6
Min nTPM: 27.3
RHH5202_R3573
27.3
RHH5230_R3602
61.9
RHH5259_R3631
66.6
RHH5288_R3660
42.2
Effector memory CD8 T-cell nTPM: 79.9
Samples: 4
Max nTPM: 103.8
Min nTPM: 52.3
RHH5203_R3574
65.8
RHH5231_R3603
97.6
RHH5260_R3632
103.8
RHH5289_R3661
52.3
MAIT T-cell nTPM: 56.7
Samples: 4
Max nTPM: 64.5
Min nTPM: 47.2
RHH5233_R3605
47.2
RHH5205_R3576
63.6
RHH5262_R3634
64.5
RHH5297_R3663
51.4
Memory CD4 T-cell TFH nTPM: 43.8
Samples: 4
Max nTPM: 70.7
Min nTPM: 14.5
RHH5300_R3666
49.2
RHH5236_R3608
70.7
RHH5265_R3637
40.9
RHH5208_R3579
14.5
Memory CD4 T-cell Th1 nTPM: 51.8
Samples: 4
Max nTPM: 83.5
Min nTPM: 29.4
RHH5210_R3581
29.4
RHH5302_R3668
35.5
RHH5238_R3610
83.5
RHH5267_R3639
58.9
Memory CD4 T-cell Th1/Th17 nTPM: 61.7
Samples: 4
Max nTPM: 85.6
Min nTPM: 34.0
RHH5303_R3669
34.0
RHH5211_R3582
74.0
RHH5239_R3611
85.6
RHH5268_R3640
53.0
Memory CD4 T-cell Th17 nTPM: 63.0
Samples: 4
Max nTPM: 78.4
Min nTPM: 44.0
RHH5304_R3670
44.0
RHH5212_R3583
78.4
RHH5240_R3612
60.0
RHH5269_R3641
69.6
Memory CD4 T-cell Th2 nTPM: 54.2
Samples: 4
Max nTPM: 63.8
Min nTPM: 40.5
RHH5305_R3671
49.7
RHH5213_R3584
63.8
RHH5241_R3613
40.5
RHH5270_R3642
62.9
Naive CD4 T-cell nTPM: 24.1
Samples: 4
Max nTPM: 26.0
Min nTPM: 22.2
RHH5306_R3672
26.0
RHH5214_R3585
22.3
RHH5242_R3614
25.9
RHH5271_R3643
22.2
Naive CD8 T-cell nTPM: 21.4
Samples: 4
Max nTPM: 30.5
Min nTPM: 8.6
RHH5201_R3572
8.6
RHH5229_R3601
30.5
RHH5258_R3630
21.8
RHH5287_R3659
24.5
Non-Vd2 gdTCR nTPM: 73.1
Samples: 4
Max nTPM: 110.1
Min nTPM: 52.5
RHH5235_R3607
110.1
RHH5264_R3636
52.5
RHH5207_R3578
58.3
RHH5299_R3665
71.3
T-reg nTPM: 63.2
Samples: 4
Max nTPM: 90.3
Min nTPM: 50.3
RHH5301_R3667
50.3
RHH5237_R3609
90.3
RHH5266_R3638
52.6
RHH5209_R3580
59.7
Terminal effector memory CD4 T-cell nTPM: 92.5
Samples: 2
Max nTPM: 118.4
Min nTPM: 66.5
RHH5243_R3615
118.4
RHH5272_R3644
66.5
Terminal effector memory CD8 T-cell nTPM: 72.4
Samples: 4
Max nTPM: 119.9
Min nTPM: 41.4
RHH5232_R3604
77.8
RHH5204_R3575
50.6
RHH5261_R3633
119.9
RHH5296_R3662
41.4
Vd2 gdTCR nTPM: 66.3
Samples: 4
Max nTPM: 87.9
Min nTPM: 52.9
RHH5234_R3606
71.0
RHH5206_R3577
53.3
RHH5263_R3635
87.9
RHH5298_R3664
52.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
