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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
241.8
nTPM
Monaco:
228.3
nTPM
Schmiedel:
476.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
241.8
HPA sample
nTPM
gdT-cell nTPM: 202.9
Samples: 6
Max nTPM: 254.6
Min nTPM: 152.6
P10809_1007
152.6
P10809_1022
242.2
P10809_1041
254.6
P10809_1060
189.7
P10809_1077
189.6
P10809_1098
188.4
MAIT T-cell nTPM: 170.5
Samples: 6
Max nTPM: 194.3
Min nTPM: 126.7
P10809_1006
126.7
P10809_1024
191.1
P10809_1043
194.3
P10809_1062
172.8
P10809_1083
160.4
P10809_1097
177.7
Memory CD4 T-cell nTPM: 178.1
Samples: 6
Max nTPM: 193.3
Min nTPM: 141.8
P10809_1014
141.8
P10809_1026
193.3
P10809_1045
173.7
P10809_1064
186.8
P10809_1086
186.8
P10809_1113
186.3
Memory CD8 T-cell nTPM: 179.0
Samples: 5
Max nTPM: 198.4
Min nTPM: 130.6
P10809_1012
130.6
P10809_1027
198.4
P10809_1046
193.8
P10809_1065
175.3
P10809_1111
197.1
Naive CD4 T-cell nTPM: 144.4
Samples: 6
Max nTPM: 176.4
Min nTPM: 105.8
P10809_1015
105.8
P10809_1030
136.5
P10809_1049
176.4
P10809_1068
149.5
P10809_1085
151.9
P10809_1112
146.3
Naive CD8 T-cell nTPM: 167.7
Samples: 6
Max nTPM: 202.7
Min nTPM: 116.2
P10809_1016
116.2
P10809_1031
147.8
P10809_1050
164.5
P10809_1069
202.7
P10809_1087
199.9
P10809_1110
175.3
T-reg nTPM: 241.8
Samples: 6
Max nTPM: 289.8
Min nTPM: 197.5
P10809_1018
197.5
P10809_1037
288.8
P10809_1056
289.8
P10809_1075
211.4
P10809_1094
227.7
P10809_1106
235.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
228.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 151.0
Samples: 4
Max nTPM: 235.4
Min nTPM: 95.6
RHH5202_R3573
164.1
RHH5230_R3602
108.7
RHH5259_R3631
95.6
RHH5288_R3660
235.4
Effector memory CD8 T-cell nTPM: 157.0
Samples: 4
Max nTPM: 215.6
Min nTPM: 114.0
RHH5203_R3574
215.6
RHH5231_R3603
171.5
RHH5260_R3632
114.0
RHH5289_R3661
126.8
MAIT T-cell nTPM: 161.6
Samples: 4
Max nTPM: 216.4
Min nTPM: 114.5
RHH5233_R3605
171.6
RHH5205_R3576
114.5
RHH5262_R3634
143.9
RHH5297_R3663
216.4
Memory CD4 T-cell TFH nTPM: 185.7
Samples: 4
Max nTPM: 217.0
Min nTPM: 136.9
RHH5300_R3666
217.0
RHH5236_R3608
183.3
RHH5265_R3637
136.9
RHH5208_R3579
205.7
Memory CD4 T-cell Th1 nTPM: 166.0
Samples: 4
Max nTPM: 249.9
Min nTPM: 120.7
RHH5210_R3581
165.3
RHH5302_R3668
249.9
RHH5238_R3610
128.0
RHH5267_R3639
120.7
Memory CD4 T-cell Th1/Th17 nTPM: 162.9
Samples: 4
Max nTPM: 258.8
Min nTPM: 73.3
RHH5303_R3669
258.8
RHH5211_R3582
220.5
RHH5239_R3611
73.3
RHH5268_R3640
99.0
Memory CD4 T-cell Th17 nTPM: 122.7
Samples: 4
Max nTPM: 180.8
Min nTPM: 87.6
RHH5304_R3670
129.8
RHH5212_R3583
180.8
RHH5240_R3612
87.6
RHH5269_R3641
92.5
Memory CD4 T-cell Th2 nTPM: 150.5
Samples: 4
Max nTPM: 190.1
Min nTPM: 97.2
RHH5305_R3671
169.2
RHH5213_R3584
145.3
RHH5241_R3613
190.1
RHH5270_R3642
97.2
Naive CD4 T-cell nTPM: 140.2
Samples: 4
Max nTPM: 221.4
Min nTPM: 79.1
RHH5306_R3672
157.0
RHH5214_R3585
221.4
RHH5242_R3614
103.3
RHH5271_R3643
79.1
Naive CD8 T-cell nTPM: 126.2
Samples: 4
Max nTPM: 172.7
Min nTPM: 70.4
RHH5201_R3572
165.8
RHH5229_R3601
70.4
RHH5258_R3630
172.7
RHH5287_R3659
95.7
Non-Vd2 gdTCR nTPM: 208.0
Samples: 4
Max nTPM: 304.8
Min nTPM: 110.9
RHH5235_R3607
110.9
RHH5264_R3636
228.9
RHH5207_R3578
187.2
RHH5299_R3665
304.8
T-reg nTPM: 163.4
Samples: 4
Max nTPM: 215.5
Min nTPM: 108.7
RHH5301_R3667
215.5
RHH5237_R3609
202.0
RHH5266_R3638
108.7
RHH5209_R3580
127.5
Terminal effector memory CD4 T-cell nTPM: 152.7
Samples: 2
Max nTPM: 209.2
Min nTPM: 96.1
RHH5243_R3615
96.1
RHH5272_R3644
209.2
Terminal effector memory CD8 T-cell nTPM: 228.3
Samples: 4
Max nTPM: 344.7
Min nTPM: 114.3
RHH5232_R3604
198.7
RHH5204_R3575
344.7
RHH5261_R3633
114.3
RHH5296_R3662
255.6
Vd2 gdTCR nTPM: 216.4
Samples: 4
Max nTPM: 323.3
Min nTPM: 118.1
RHH5234_R3606
186.2
RHH5206_R3577
323.3
RHH5263_R3635
118.1
RHH5298_R3664
237.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.