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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.1
nTPM
Monaco:
288.0
nTPM
Schmiedel:
86.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.1
HPA sample
nTPM
gdT-cell nTPM: 56.1
Samples: 6
Max nTPM: 72.1
Min nTPM: 45.6
P10809_1007
48.5
P10809_1022
45.6
P10809_1041
63.4
P10809_1060
45.7
P10809_1077
72.1
P10809_1098
61.1
MAIT T-cell nTPM: 47.0
Samples: 6
Max nTPM: 62.0
Min nTPM: 33.8
P10809_1006
39.0
P10809_1024
50.4
P10809_1043
33.8
P10809_1062
42.4
P10809_1083
62.0
P10809_1097
54.4
Memory CD4 T-cell nTPM: 57.1
Samples: 6
Max nTPM: 81.8
Min nTPM: 43.1
P10809_1014
56.4
P10809_1026
48.4
P10809_1045
43.1
P10809_1064
58.8
P10809_1086
81.8
P10809_1113
54.1
Memory CD8 T-cell nTPM: 52.0
Samples: 5
Max nTPM: 66.0
Min nTPM: 40.1
P10809_1012
51.1
P10809_1027
40.1
P10809_1046
44.9
P10809_1065
66.0
P10809_1111
58.1
Naive CD4 T-cell nTPM: 37.2
Samples: 6
Max nTPM: 51.8
Min nTPM: 24.9
P10809_1015
51.8
P10809_1030
29.3
P10809_1049
24.9
P10809_1068
31.5
P10809_1085
48.3
P10809_1112
37.3
Naive CD8 T-cell nTPM: 47.2
Samples: 6
Max nTPM: 88.5
Min nTPM: 26.3
P10809_1016
35.4
P10809_1031
26.3
P10809_1050
35.3
P10809_1069
61.6
P10809_1087
88.5
P10809_1110
35.9
T-reg nTPM: 46.9
Samples: 6
Max nTPM: 55.5
Min nTPM: 29.9
P10809_1018
45.4
P10809_1037
52.3
P10809_1056
29.9
P10809_1075
49.1
P10809_1094
49.0
P10809_1106
55.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
288.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 122.1
Samples: 4
Max nTPM: 145.0
Min nTPM: 80.4
RHH5202_R3573
132.3
RHH5230_R3602
145.0
RHH5259_R3631
80.4
RHH5288_R3660
130.6
Effector memory CD8 T-cell nTPM: 214.1
Samples: 4
Max nTPM: 315.0
Min nTPM: 132.0
RHH5203_R3574
181.7
RHH5231_R3603
227.5
RHH5260_R3632
132.0
RHH5289_R3661
315.0
MAIT T-cell nTPM: 166.2
Samples: 4
Max nTPM: 180.4
Min nTPM: 155.1
RHH5233_R3605
167.5
RHH5205_R3576
161.9
RHH5262_R3634
180.4
RHH5297_R3663
155.1
Memory CD4 T-cell TFH nTPM: 138.4
Samples: 4
Max nTPM: 159.5
Min nTPM: 120.2
RHH5300_R3666
130.6
RHH5236_R3608
143.3
RHH5265_R3637
159.5
RHH5208_R3579
120.2
Memory CD4 T-cell Th1 nTPM: 126.9
Samples: 4
Max nTPM: 161.7
Min nTPM: 81.6
RHH5210_R3581
130.2
RHH5302_R3668
161.7
RHH5238_R3610
81.6
RHH5267_R3639
134.2
Memory CD4 T-cell Th1/Th17 nTPM: 157.2
Samples: 4
Max nTPM: 208.4
Min nTPM: 89.9
RHH5303_R3669
208.4
RHH5211_R3582
151.1
RHH5239_R3611
89.9
RHH5268_R3640
179.5
Memory CD4 T-cell Th17 nTPM: 196.1
Samples: 4
Max nTPM: 246.5
Min nTPM: 156.0
RHH5304_R3670
213.7
RHH5212_R3583
168.2
RHH5240_R3612
246.5
RHH5269_R3641
156.0
Memory CD4 T-cell Th2 nTPM: 212.4
Samples: 4
Max nTPM: 248.7
Min nTPM: 180.1
RHH5305_R3671
214.0
RHH5213_R3584
248.7
RHH5241_R3613
206.6
RHH5270_R3642
180.1
Naive CD4 T-cell nTPM: 119.5
Samples: 4
Max nTPM: 131.9
Min nTPM: 105.2
RHH5306_R3672
131.9
RHH5214_R3585
105.2
RHH5242_R3614
113.7
RHH5271_R3643
127.3
Naive CD8 T-cell nTPM: 87.6
Samples: 4
Max nTPM: 128.1
Min nTPM: 45.2
RHH5201_R3572
128.1
RHH5229_R3601
45.2
RHH5258_R3630
81.8
RHH5287_R3659
95.2
Non-Vd2 gdTCR nTPM: 262.6
Samples: 4
Max nTPM: 344.1
Min nTPM: 196.9
RHH5235_R3607
196.9
RHH5264_R3636
240.0
RHH5207_R3578
344.1
RHH5299_R3665
269.5
T-reg nTPM: 128.9
Samples: 4
Max nTPM: 145.2
Min nTPM: 121.4
RHH5301_R3667
125.9
RHH5237_R3609
145.2
RHH5266_R3638
121.4
RHH5209_R3580
123.1
Terminal effector memory CD4 T-cell nTPM: 259.2
Samples: 2
Max nTPM: 262.3
Min nTPM: 256.0
RHH5243_R3615
262.3
RHH5272_R3644
256.0
Terminal effector memory CD8 T-cell nTPM: 288.0
Samples: 4
Max nTPM: 330.6
Min nTPM: 195.8
RHH5232_R3604
313.7
RHH5204_R3575
195.8
RHH5261_R3633
311.8
RHH5296_R3662
330.6
Vd2 gdTCR nTPM: 169.0
Samples: 4
Max nTPM: 243.4
Min nTPM: 135.3
RHH5234_R3606
135.3
RHH5206_R3577
243.4
RHH5263_R3635
149.9
RHH5298_R3664
147.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
