HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:31.0 nTPM
HPA Brain:77.8 nTPM
GTEx:31.0 nTPM
FANTOM5:121.5 Scaled Tags Per Million
Pig:146.8 nTPM
Mouse:104.0 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004802
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.0
1855 Male, age 76, left hemisphere 77.1
1898 Male, age 80, left hemisphere 70.1
2621 Female, age 67, right hemisphere 53.4
2148 Female, age 91, left hemisphere 49.3
2529 Female, age 94, left hemisphere 34.9
1911 Female, age 85, right hemisphere 21.0
Dentate gyrus
nTPM: 65.6
2246 Female, age 85, both hemispheres 87.9
2531 Female, age 67, both hemispheres 84.1
2010 Male, age 76, both hemispheres 73.8
2528 Male, age 74, both hemispheres 51.9
2530 Female, age 94, left hemisphere 49.9
1927 Female, age 91, both hemispheres 45.8
Entorhinal gyrus
nTPM: 18.3
1787 Male, age 76, left hemisphere 31.7
2117 Female, age 91, right hemisphere 24.5
2764 Male, age 80, right hemisphere 22.8
2686 Male, age 75, right hemisphere 13.0
1938 Female, age 85, left hemisphere 10.1
2613 Female, age 94, left hemisphere 7.9
Hippocampus, CA1
nTPM: 77.8
2082 Female, age 91, right hemisphere 146.7
2527 Male, age 74, both hemispheres 69.7
2045 Male, age 76, both hemispheres 63.4
2749 Male, age 80, left hemisphere 59.4
1873 Female, age 85, both hemispheres 49.7
Hippocampus, CA2
nTPM: 51.7
2113 Female, age 91, right hemisphere 72.0
1892 Male, age 76, both hemispheres 64.6
1940 Female, age 85, left hemisphere 57.6
1963 Male, age 80, left hemisphere 44.2
2249 Male, age 74, both hemispheres 39.1
2437 Female, age 94, left hemisphere 32.8
Hippocampus, CA3
nTPM: 53.0
2620 Female, age 94, left hemisphere 112.2
2861 Female, age 67, both hemispheres 55.7
1867 Male, age 76, both hemispheres 50.8
2436 Male, age 74, both hemispheres 43.4
1891 Female, age 85, both hemispheres 33.2
2137 Male, age 80, left hemisphere 22.5
Parahippocampal cortex
nTPM: 41.3
2018 Male, age 76, both hemispheres 81.2
2245 Female, age 91, both hemispheres 72.0
2250 Female, age 67, right hemisphere 67.9
2693 Female, age 94, both hemispheres 61.0
1933 Female, age 85, both hemispheres 37.4
2532 Female, age 72, left hemisphere 22.3
1850 Male, age 80, both hemispheres 21.8
1990 Female, age 91, right hemisphere 21.6
2622 Female, age 67, right hemisphere 18.3
2692 Male, age 74, both hemispheres 9.6
Perirhinal gyrus
nTPM: 73.8
2521 Female, age 94, right hemisphere 110.2
1794 Male, age 80, right hemisphere 88.9
1847 Female, age 91, left hemisphere 83.8
1841 Female, age 85, right hemisphere 52.4
2848 Male, age 76, right hemisphere 34.0
Subiculum
nTPM: 35.9
2729 Female, age 91, right hemisphere 59.1
1977 Female, age 85, both hemispheres 53.6
2438 Female, age 94, left hemisphere 28.9
2619 Male, age 74, both hemispheres 28.2
1901 Male, age 80, both hemispheres 24.7
2042 Male, age 76, both hemispheres 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.0
Samples: 197

Max nTPM: 121.5
Min nTPM: 2.9
Std nTPM: 21.6
Median nTPM: 27.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 121.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 98.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 96.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 86.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 83.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 79.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 79.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 77.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 76.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 75.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 72.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 121.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 121.5
FF:10169-103B7 60 years, female 192.1
FF:10153-102I9 76 years, female 50.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 146.8
Pig sample Sample description nTPM
Subiculum
nTPM: 67.3
Samples: 4

Max nTPM: 74.3
Min nTPM: 62.3
Sample A Female 70.0
Sample B Female 62.3
Sample C Male 74.3
Sample D Male 62.4
Dorsal hippocampus
nTPM: 43.0
Samples: 4

Max nTPM: 62.9
Min nTPM: 22.4
Sample A Female 53.7
Sample B Female 62.9
Sample C Male 33.0
Sample D Male 22.4
Entorhinal cortex
nTPM: 146.8
Samples: 4

Max nTPM: 212.6
Min nTPM: 113.9
Sample A Female 212.6
Sample B Female 131.5
Sample C Male 129.3
Sample D Male 113.9
Ventral hippocampus
nTPM: 57.2
Samples: 4

Max nTPM: 85.8
Min nTPM: 40.6
Sample A Female 41.0
Sample B Female 40.6
Sample C Male 61.3
Sample D Male 85.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 104.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.1
Samples: 4

Max nTPM: 143.0
Min nTPM: 68.0
Sample A Male 107.7
Sample B Male 143.0
Sample C Female 68.0
Sample D Female 97.5
Hippocampal formation
nTPM: 32.6
Samples: 4

Max nTPM: 47.2
Min nTPM: 25.8
Sample A Male 47.2
Sample B Male 25.8
Sample C Female 27.6
Sample D Female 29.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
70927827 Antisense, RP_050725_01_B03, Mouse strain C57BL/6J (56 days, male) 5.1
413779 Antisense, RP_040809_01_C11, Mouse strain C57BL/6J (56 days, male) 4.2

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