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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
43.1
nTPM
Monaco:
69.0
nTPM
Schmiedel:
22.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.1
HPA sample
nTPM
gdT-cell nTPM: 13.3
Samples: 6
Max nTPM: 21.4
Min nTPM: 5.7
P10809_1007
21.4
P10809_1022
7.8
P10809_1041
14.2
P10809_1060
5.7
P10809_1077
12.0
P10809_1098
18.4
MAIT T-cell nTPM: 11.8
Samples: 6
Max nTPM: 21.2
Min nTPM: 4.1
P10809_1006
19.0
P10809_1024
4.1
P10809_1043
11.0
P10809_1062
7.3
P10809_1083
7.9
P10809_1097
21.2
Memory CD4 T-cell nTPM: 23.8
Samples: 6
Max nTPM: 37.7
Min nTPM: 6.7
P10809_1014
37.7
P10809_1026
33.0
P10809_1045
28.6
P10809_1064
28.3
P10809_1086
8.3
P10809_1113
6.7
Memory CD8 T-cell nTPM: 27.2
Samples: 5
Max nTPM: 33.1
Min nTPM: 18.6
P10809_1012
33.1
P10809_1027
18.6
P10809_1046
32.6
P10809_1065
23.5
P10809_1111
28.3
Naive CD4 T-cell nTPM: 28.1
Samples: 6
Max nTPM: 38.1
Min nTPM: 16.2
P10809_1015
31.4
P10809_1030
34.9
P10809_1049
38.1
P10809_1068
18.0
P10809_1085
30.1
P10809_1112
16.2
Naive CD8 T-cell nTPM: 28.0
Samples: 6
Max nTPM: 37.7
Min nTPM: 5.1
P10809_1016
36.5
P10809_1031
37.7
P10809_1050
23.7
P10809_1069
31.1
P10809_1087
5.1
P10809_1110
34.0
T-reg nTPM: 43.1
Samples: 6
Max nTPM: 115.7
Min nTPM: 17.0
P10809_1018
25.2
P10809_1037
32.2
P10809_1056
115.7
P10809_1075
29.4
P10809_1094
17.0
P10809_1106
39.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.3
Samples: 4
Max nTPM: 37.4
Min nTPM: 1.6
RHH5202_R3573
1.6
RHH5230_R3602
18.1
RHH5259_R3631
37.4
RHH5288_R3660
12.1
Effector memory CD8 T-cell nTPM: 27.7
Samples: 4
Max nTPM: 56.0
Min nTPM: 5.8
RHH5203_R3574
16.2
RHH5231_R3603
32.6
RHH5260_R3632
56.0
RHH5289_R3661
5.8
MAIT T-cell nTPM: 18.7
Samples: 4
Max nTPM: 44.4
Min nTPM: 7.8
RHH5233_R3605
7.8
RHH5205_R3576
12.5
RHH5262_R3634
44.4
RHH5297_R3663
10.2
Memory CD4 T-cell TFH nTPM: 32.3
Samples: 4
Max nTPM: 46.2
Min nTPM: 2.1
RHH5300_R3666
43.7
RHH5236_R3608
46.2
RHH5265_R3637
37.0
RHH5208_R3579
2.1
Memory CD4 T-cell Th1 nTPM: 18.4
Samples: 4
Max nTPM: 36.7
Min nTPM: 9.4
RHH5210_R3581
11.5
RHH5302_R3668
9.4
RHH5238_R3610
15.8
RHH5267_R3639
36.7
Memory CD4 T-cell Th1/Th17 nTPM: 16.1
Samples: 4
Max nTPM: 30.5
Min nTPM: 4.8
RHH5303_R3669
4.8
RHH5211_R3582
19.2
RHH5239_R3611
9.8
RHH5268_R3640
30.5
Memory CD4 T-cell Th17 nTPM: 19.4
Samples: 4
Max nTPM: 40.1
Min nTPM: 3.1
RHH5304_R3670
4.6
RHH5212_R3583
29.8
RHH5240_R3612
3.1
RHH5269_R3641
40.1
Memory CD4 T-cell Th2 nTPM: 25.4
Samples: 4
Max nTPM: 58.8
Min nTPM: 5.0
RHH5305_R3671
17.5
RHH5213_R3584
20.1
RHH5241_R3613
5.0
RHH5270_R3642
58.8
Naive CD4 T-cell nTPM: 35.3
Samples: 4
Max nTPM: 52.1
Min nTPM: 12.3
RHH5306_R3672
38.2
RHH5214_R3585
52.1
RHH5242_R3614
12.3
RHH5271_R3643
38.4
Naive CD8 T-cell nTPM: 25.0
Samples: 4
Max nTPM: 47.4
Min nTPM: 1.4
RHH5201_R3572
1.4
RHH5229_R3601
19.8
RHH5258_R3630
47.4
RHH5287_R3659
31.5
Non-Vd2 gdTCR nTPM: 25.9
Samples: 4
Max nTPM: 40.0
Min nTPM: 8.2
RHH5235_R3607
34.4
RHH5264_R3636
21.1
RHH5207_R3578
8.2
RHH5299_R3665
40.0
T-reg nTPM: 69.0
Samples: 4
Max nTPM: 88.4
Min nTPM: 49.2
RHH5301_R3667
49.2
RHH5237_R3609
81.7
RHH5266_R3638
88.4
RHH5209_R3580
56.8
Terminal effector memory CD4 T-cell nTPM: 15.2
Samples: 2
Max nTPM: 18.3
Min nTPM: 12.1
RHH5243_R3615
12.1
RHH5272_R3644
18.3
Terminal effector memory CD8 T-cell nTPM: 20.6
Samples: 4
Max nTPM: 43.2
Min nTPM: 8.1
RHH5232_R3604
9.3
RHH5204_R3575
21.6
RHH5261_R3633
43.2
RHH5296_R3662
8.1
Vd2 gdTCR nTPM: 23.0
Samples: 4
Max nTPM: 42.7
Min nTPM: 8.0
RHH5234_R3606
19.3
RHH5206_R3577
8.0
RHH5263_R3635
42.7
RHH5298_R3664
22.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
