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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
88.1
nTPM
Monaco:
62.0
nTPM
Schmiedel:
79.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.1
HPA sample
nTPM
gdT-cell nTPM: 68.7
Samples: 6
Max nTPM: 83.9
Min nTPM: 44.4
P10809_1007
44.4
P10809_1022
79.2
P10809_1041
71.6
P10809_1060
83.9
P10809_1077
64.1
P10809_1098
69.1
MAIT T-cell nTPM: 88.1
Samples: 6
Max nTPM: 127.6
Min nTPM: 51.4
P10809_1006
51.4
P10809_1024
90.0
P10809_1043
95.1
P10809_1062
94.8
P10809_1083
69.8
P10809_1097
127.6
Memory CD4 T-cell nTPM: 76.6
Samples: 6
Max nTPM: 103.7
Min nTPM: 54.6
P10809_1014
54.6
P10809_1026
103.7
P10809_1045
81.5
P10809_1064
68.1
P10809_1086
68.3
P10809_1113
83.1
Memory CD8 T-cell nTPM: 74.6
Samples: 5
Max nTPM: 86.0
Min nTPM: 59.7
P10809_1012
59.7
P10809_1027
76.4
P10809_1046
86.0
P10809_1065
74.1
P10809_1111
77.0
Naive CD4 T-cell nTPM: 87.6
Samples: 6
Max nTPM: 123.5
Min nTPM: 56.5
P10809_1015
56.5
P10809_1030
104.2
P10809_1049
123.5
P10809_1068
89.3
P10809_1085
59.6
P10809_1112
92.2
Naive CD8 T-cell nTPM: 75.2
Samples: 6
Max nTPM: 89.8
Min nTPM: 59.5
P10809_1016
59.5
P10809_1031
86.2
P10809_1050
81.8
P10809_1069
89.8
P10809_1087
61.7
P10809_1110
71.9
T-reg nTPM: 66.0
Samples: 6
Max nTPM: 90.0
Min nTPM: 46.8
P10809_1018
57.5
P10809_1037
75.1
P10809_1056
90.0
P10809_1075
51.0
P10809_1094
46.8
P10809_1106
75.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.8
Samples: 4
Max nTPM: 59.1
Min nTPM: 31.0
RHH5202_R3573
42.2
RHH5230_R3602
34.9
RHH5259_R3631
31.0
RHH5288_R3660
59.1
Effector memory CD8 T-cell nTPM: 34.7
Samples: 4
Max nTPM: 51.8
Min nTPM: 26.8
RHH5203_R3574
33.0
RHH5231_R3603
51.8
RHH5260_R3632
26.8
RHH5289_R3661
27.2
MAIT T-cell nTPM: 53.7
Samples: 4
Max nTPM: 78.8
Min nTPM: 27.1
RHH5233_R3605
45.9
RHH5205_R3576
27.1
RHH5262_R3634
63.0
RHH5297_R3663
78.8
Memory CD4 T-cell TFH nTPM: 53.2
Samples: 4
Max nTPM: 70.5
Min nTPM: 36.5
RHH5300_R3666
70.5
RHH5236_R3608
65.3
RHH5265_R3637
40.3
RHH5208_R3579
36.5
Memory CD4 T-cell Th1 nTPM: 51.4
Samples: 4
Max nTPM: 71.3
Min nTPM: 32.7
RHH5210_R3581
60.8
RHH5302_R3668
71.3
RHH5238_R3610
32.7
RHH5267_R3639
40.7
Memory CD4 T-cell Th1/Th17 nTPM: 47.3
Samples: 4
Max nTPM: 75.4
Min nTPM: 13.2
RHH5303_R3669
53.5
RHH5211_R3582
75.4
RHH5239_R3611
13.2
RHH5268_R3640
47.0
Memory CD4 T-cell Th17 nTPM: 37.2
Samples: 4
Max nTPM: 49.8
Min nTPM: 26.7
RHH5304_R3670
37.4
RHH5212_R3583
49.8
RHH5240_R3612
26.7
RHH5269_R3641
34.9
Memory CD4 T-cell Th2 nTPM: 46.6
Samples: 4
Max nTPM: 56.5
Min nTPM: 31.0
RHH5305_R3671
56.5
RHH5213_R3584
49.6
RHH5241_R3613
49.1
RHH5270_R3642
31.0
Naive CD4 T-cell nTPM: 61.1
Samples: 4
Max nTPM: 84.8
Min nTPM: 42.5
RHH5306_R3672
66.2
RHH5214_R3585
84.8
RHH5242_R3614
42.5
RHH5271_R3643
50.8
Naive CD8 T-cell nTPM: 47.8
Samples: 4
Max nTPM: 90.6
Min nTPM: 22.0
RHH5201_R3572
22.0
RHH5229_R3601
27.1
RHH5258_R3630
90.6
RHH5287_R3659
51.4
Non-Vd2 gdTCR nTPM: 46.5
Samples: 4
Max nTPM: 69.1
Min nTPM: 22.0
RHH5235_R3607
22.0
RHH5264_R3636
56.7
RHH5207_R3578
38.2
RHH5299_R3665
69.1
T-reg nTPM: 62.0
Samples: 4
Max nTPM: 79.2
Min nTPM: 40.1
RHH5301_R3667
79.2
RHH5237_R3609
77.7
RHH5266_R3638
40.1
RHH5209_R3580
50.9
Terminal effector memory CD4 T-cell nTPM: 54.3
Samples: 2
Max nTPM: 86.8
Min nTPM: 21.7
RHH5243_R3615
21.7
RHH5272_R3644
86.8
Terminal effector memory CD8 T-cell nTPM: 46.0
Samples: 4
Max nTPM: 55.7
Min nTPM: 39.0
RHH5232_R3604
47.7
RHH5204_R3575
55.7
RHH5261_R3633
39.0
RHH5296_R3662
41.4
Vd2 gdTCR nTPM: 49.9
Samples: 4
Max nTPM: 71.7
Min nTPM: 30.6
RHH5234_R3606
30.6
RHH5206_R3577
71.7
RHH5263_R3635
36.7
RHH5298_R3664
60.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
