HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:41.6 nTPM
HPA Brain:31.7 nTPM
GTEx:41.6 nTPM
FANTOM5:74.3 Scaled Tags Per Million
Pig:58.5 nTPM
Mouse:63.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026092Antibody CAB011687
Glial cells HighHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.7
Sample id Sample description nTPM
Hippocampus
nTPM: 30.1
1898 Male, age 80, left hemisphere 32.5
1855 Male, age 76, left hemisphere 30.0
2529 Female, age 94, left hemisphere 29.9
1911 Female, age 85, right hemisphere 29.7
2148 Female, age 91, left hemisphere 29.4
2621 Female, age 67, right hemisphere 28.9
Dentate gyrus
nTPM: 30.7
2010 Male, age 76, both hemispheres 34.6
1927 Female, age 91, both hemispheres 32.1
2246 Female, age 85, both hemispheres 31.5
2530 Female, age 94, left hemisphere 30.0
2531 Female, age 67, both hemispheres 28.7
2528 Male, age 74, both hemispheres 27.2
Entorhinal gyrus
nTPM: 30.1
2117 Female, age 91, right hemisphere 33.8
1938 Female, age 85, left hemisphere 31.2
1787 Male, age 76, left hemisphere 29.8
2764 Male, age 80, right hemisphere 29.8
2686 Male, age 75, right hemisphere 29.4
2613 Female, age 94, left hemisphere 26.8
Hippocampus, CA1
nTPM: 31.0
1873 Female, age 85, both hemispheres 32.4
2045 Male, age 76, both hemispheres 31.9
2749 Male, age 80, left hemisphere 30.8
2082 Female, age 91, right hemisphere 29.9
2527 Male, age 74, both hemispheres 29.9
Hippocampus, CA2
nTPM: 29.3
2113 Female, age 91, right hemisphere 31.1
1892 Male, age 76, both hemispheres 30.4
1940 Female, age 85, left hemisphere 29.2
2249 Male, age 74, both hemispheres 29.0
1963 Male, age 80, left hemisphere 28.7
2437 Female, age 94, left hemisphere 27.6
Hippocampus, CA3
nTPM: 28.8
1891 Female, age 85, both hemispheres 34.5
2137 Male, age 80, left hemisphere 33.0
1867 Male, age 76, both hemispheres 30.2
2436 Male, age 74, both hemispheres 28.3
2620 Female, age 94, left hemisphere 23.8
2861 Female, age 67, both hemispheres 23.4
Parahippocampal cortex
nTPM: 30.5
1850 Male, age 80, both hemispheres 35.7
2532 Female, age 72, left hemisphere 33.0
2018 Male, age 76, both hemispheres 32.5
1933 Female, age 85, both hemispheres 32.2
1990 Female, age 91, right hemisphere 30.3
2245 Female, age 91, both hemispheres 29.7
2250 Female, age 67, right hemisphere 29.0
2692 Male, age 74, both hemispheres 28.6
2693 Female, age 94, both hemispheres 28.6
2622 Female, age 67, right hemisphere 25.6
Perirhinal gyrus
nTPM: 31.1
1841 Female, age 85, right hemisphere 34.5
1794 Male, age 80, right hemisphere 33.1
2848 Male, age 76, right hemisphere 32.0
1847 Female, age 91, left hemisphere 29.3
2521 Female, age 94, right hemisphere 26.9
Subiculum
nTPM: 31.7
1901 Male, age 80, both hemispheres 35.3
1977 Female, age 85, both hemispheres 35.0
2042 Male, age 76, both hemispheres 33.0
2438 Female, age 94, left hemisphere 30.4
2619 Male, age 74, both hemispheres 28.6
2729 Female, age 91, right hemisphere 28.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.6
Samples: 197

Max nTPM: 64.8
Min nTPM: 14.1
Std nTPM: 9.5
Median nTPM: 42.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 64.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 63.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 63.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 62.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 60.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 59.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 58.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 58.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 57.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 55.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 54.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.3
FF:10153-102I9 76 years, female 82.1
FF:10169-103B7 60 years, female 66.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.5
Pig sample Sample description nTPM
Subiculum
nTPM: 54.5
Samples: 4

Max nTPM: 63.0
Min nTPM: 50.5
Sample A Female 63.0
Sample B Female 52.7
Sample C Male 51.8
Sample D Male 50.5
Dorsal hippocampus
nTPM: 58.5
Samples: 4

Max nTPM: 67.1
Min nTPM: 53.3
Sample A Female 67.1
Sample B Female 54.6
Sample C Male 59.1
Sample D Male 53.3
Entorhinal cortex
nTPM: 49.1
Samples: 4

Max nTPM: 53.0
Min nTPM: 45.2
Sample A Female 48.7
Sample B Female 53.0
Sample C Male 49.4
Sample D Male 45.2
Ventral hippocampus
nTPM: 53.9
Samples: 4

Max nTPM: 56.9
Min nTPM: 50.9
Sample A Female 56.9
Sample B Female 50.9
Sample C Male 51.5
Sample D Male 56.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.1
Samples: 4

Max nTPM: 67.2
Min nTPM: 59.4
Sample A Male 59.5
Sample B Male 62.1
Sample C Female 59.4
Sample D Female 67.2
Hippocampal formation
nTPM: 63.4
Samples: 4

Max nTPM: 69.0
Min nTPM: 57.9
Sample A Male 64.7
Sample B Male 69.0
Sample C Female 61.8
Sample D Female 57.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71723961 Antisense, RP_050921_01_C03, Mouse strain C57BL/6J (56 days, male) 0.0

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