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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.6
nTPM
Monaco:
175.4
nTPM
Schmiedel:
166.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.6
HPA sample
nTPM
gdT-cell nTPM: 49.1
Samples: 6
Max nTPM: 58.2
Min nTPM: 35.5
P10809_1007
35.5
P10809_1022
58.2
P10809_1041
52.8
P10809_1060
48.9
P10809_1077
47.3
P10809_1098
51.7
MAIT T-cell nTPM: 51.8
Samples: 6
Max nTPM: 59.2
Min nTPM: 42.5
P10809_1006
53.6
P10809_1024
57.5
P10809_1043
42.5
P10809_1062
45.7
P10809_1083
59.2
P10809_1097
52.0
Memory CD4 T-cell nTPM: 45.1
Samples: 6
Max nTPM: 49.5
Min nTPM: 41.7
P10809_1014
44.4
P10809_1026
44.0
P10809_1045
41.7
P10809_1064
49.5
P10809_1086
48.7
P10809_1113
42.4
Memory CD8 T-cell nTPM: 47.6
Samples: 5
Max nTPM: 55.1
Min nTPM: 40.9
P10809_1012
50.7
P10809_1027
47.3
P10809_1046
40.9
P10809_1065
55.1
P10809_1111
44.2
Naive CD4 T-cell nTPM: 48.1
Samples: 6
Max nTPM: 52.6
Min nTPM: 40.5
P10809_1015
52.6
P10809_1030
52.2
P10809_1049
40.5
P10809_1068
51.2
P10809_1085
46.0
P10809_1112
46.0
Naive CD8 T-cell nTPM: 45.7
Samples: 6
Max nTPM: 56.3
Min nTPM: 36.5
P10809_1016
48.3
P10809_1031
50.7
P10809_1050
36.5
P10809_1069
42.4
P10809_1087
56.3
P10809_1110
39.7
T-reg nTPM: 58.6
Samples: 6
Max nTPM: 72.8
Min nTPM: 49.2
P10809_1018
58.1
P10809_1037
72.8
P10809_1056
53.6
P10809_1075
49.2
P10809_1094
54.9
P10809_1106
62.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
175.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 135.5
Samples: 4
Max nTPM: 143.7
Min nTPM: 126.7
RHH5202_R3573
143.7
RHH5230_R3602
126.7
RHH5259_R3631
138.8
RHH5288_R3660
132.8
Effector memory CD8 T-cell nTPM: 175.4
Samples: 4
Max nTPM: 225.4
Min nTPM: 143.3
RHH5203_R3574
225.4
RHH5231_R3603
143.3
RHH5260_R3632
156.9
RHH5289_R3661
176.1
MAIT T-cell nTPM: 148.3
Samples: 4
Max nTPM: 175.5
Min nTPM: 126.1
RHH5233_R3605
163.0
RHH5205_R3576
175.5
RHH5262_R3634
128.4
RHH5297_R3663
126.1
Memory CD4 T-cell TFH nTPM: 159.1
Samples: 4
Max nTPM: 177.6
Min nTPM: 133.5
RHH5300_R3666
148.2
RHH5236_R3608
177.6
RHH5265_R3637
133.5
RHH5208_R3579
177.1
Memory CD4 T-cell Th1 nTPM: 143.5
Samples: 4
Max nTPM: 167.0
Min nTPM: 131.7
RHH5210_R3581
167.0
RHH5302_R3668
131.7
RHH5238_R3610
131.9
RHH5267_R3639
143.4
Memory CD4 T-cell Th1/Th17 nTPM: 154.4
Samples: 4
Max nTPM: 172.4
Min nTPM: 123.4
RHH5303_R3669
170.4
RHH5211_R3582
172.4
RHH5239_R3611
151.3
RHH5268_R3640
123.4
Memory CD4 T-cell Th17 nTPM: 146.1
Samples: 4
Max nTPM: 154.0
Min nTPM: 134.9
RHH5304_R3670
146.3
RHH5212_R3583
149.1
RHH5240_R3612
154.0
RHH5269_R3641
134.9
Memory CD4 T-cell Th2 nTPM: 160.2
Samples: 4
Max nTPM: 194.8
Min nTPM: 134.4
RHH5305_R3671
194.8
RHH5213_R3584
161.5
RHH5241_R3613
150.0
RHH5270_R3642
134.4
Naive CD4 T-cell nTPM: 150.0
Samples: 4
Max nTPM: 172.6
Min nTPM: 131.9
RHH5306_R3672
172.6
RHH5214_R3585
142.7
RHH5242_R3614
131.9
RHH5271_R3643
152.6
Naive CD8 T-cell nTPM: 140.4
Samples: 4
Max nTPM: 151.1
Min nTPM: 133.9
RHH5201_R3572
133.9
RHH5229_R3601
151.1
RHH5258_R3630
136.8
RHH5287_R3659
139.9
Non-Vd2 gdTCR nTPM: 164.8
Samples: 4
Max nTPM: 173.1
Min nTPM: 144.1
RHH5235_R3607
144.1
RHH5264_R3636
170.3
RHH5207_R3578
171.7
RHH5299_R3665
173.1
T-reg nTPM: 140.6
Samples: 4
Max nTPM: 166.9
Min nTPM: 119.4
RHH5301_R3667
141.4
RHH5237_R3609
166.9
RHH5266_R3638
119.4
RHH5209_R3580
134.6
Terminal effector memory CD4 T-cell nTPM: 165.4
Samples: 2
Max nTPM: 188.7
Min nTPM: 142.1
RHH5243_R3615
142.1
RHH5272_R3644
188.7
Terminal effector memory CD8 T-cell nTPM: 159.5
Samples: 4
Max nTPM: 180.1
Min nTPM: 148.5
RHH5232_R3604
159.9
RHH5204_R3575
149.5
RHH5261_R3633
148.5
RHH5296_R3662
180.1
Vd2 gdTCR nTPM: 149.1
Samples: 4
Max nTPM: 175.8
Min nTPM: 137.0
RHH5234_R3606
139.1
RHH5206_R3577
144.5
RHH5263_R3635
175.8
RHH5298_R3664
137.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
