HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:71.5 nTPM
HPA Brain:48.6 nTPM
GTEx:71.5 nTPM
FANTOM5:59.8 Scaled Tags Per Million
Pig:14.4 nTPM
Mouse:17.5 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025915
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.6
Sample id Sample description nTPM
Hippocampus
nTPM: 48.6
2529 Female, age 94, left hemisphere 68.6
1855 Male, age 76, left hemisphere 51.2
1911 Female, age 85, right hemisphere 48.5
2621 Female, age 67, right hemisphere 45.0
1898 Male, age 80, left hemisphere 43.1
2148 Female, age 91, left hemisphere 35.1
Dentate gyrus
nTPM: 42.4
2530 Female, age 94, left hemisphere 64.0
2528 Male, age 74, both hemispheres 46.9
2531 Female, age 67, both hemispheres 45.4
2246 Female, age 85, both hemispheres 35.2
2010 Male, age 76, both hemispheres 33.5
1927 Female, age 91, both hemispheres 29.7
Entorhinal gyrus
nTPM: 35.8
2117 Female, age 91, right hemisphere 54.7
1787 Male, age 76, left hemisphere 38.7
2686 Male, age 75, right hemisphere 38.1
2764 Male, age 80, right hemisphere 33.1
2613 Female, age 94, left hemisphere 25.6
1938 Female, age 85, left hemisphere 24.7
Hippocampus, CA1
nTPM: 31.5
2527 Male, age 74, both hemispheres 47.0
1873 Female, age 85, both hemispheres 37.3
2082 Female, age 91, right hemisphere 28.5
2749 Male, age 80, left hemisphere 23.7
2045 Male, age 76, both hemispheres 20.9
Hippocampus, CA2
nTPM: 43.1
1963 Male, age 80, left hemisphere 57.3
2249 Male, age 74, both hemispheres 51.8
2437 Female, age 94, left hemisphere 49.9
1940 Female, age 85, left hemisphere 40.0
2113 Female, age 91, right hemisphere 38.0
1892 Male, age 76, both hemispheres 21.5
Hippocampus, CA3
nTPM: 38.9
2861 Female, age 67, both hemispheres 67.2
1891 Female, age 85, both hemispheres 39.9
2436 Male, age 74, both hemispheres 36.8
2620 Female, age 94, left hemisphere 34.8
2137 Male, age 80, left hemisphere 30.5
1867 Male, age 76, both hemispheres 24.3
Parahippocampal cortex
nTPM: 28.1
1990 Female, age 91, right hemisphere 35.8
2622 Female, age 67, right hemisphere 34.7
2532 Female, age 72, left hemisphere 31.4
2245 Female, age 91, both hemispheres 30.8
2250 Female, age 67, right hemisphere 29.0
2692 Male, age 74, both hemispheres 28.8
1850 Male, age 80, both hemispheres 24.2
2693 Female, age 94, both hemispheres 23.8
1933 Female, age 85, both hemispheres 22.8
2018 Male, age 76, both hemispheres 19.3
Perirhinal gyrus
nTPM: 29.3
2521 Female, age 94, right hemisphere 39.1
2848 Male, age 76, right hemisphere 31.9
1841 Female, age 85, right hemisphere 27.8
1794 Male, age 80, right hemisphere 26.8
1847 Female, age 91, left hemisphere 21.2
Subiculum
nTPM: 38.6
2729 Female, age 91, right hemisphere 44.2
2619 Male, age 74, both hemispheres 42.7
2042 Male, age 76, both hemispheres 38.8
2438 Female, age 94, left hemisphere 38.3
1977 Female, age 85, both hemispheres 36.6
1901 Male, age 80, both hemispheres 30.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.5
Samples: 197

Max nTPM: 289.7
Min nTPM: 8.8
Std nTPM: 44.3
Median nTPM: 61.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 289.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 259.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 196.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 182.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 180.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 177.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 174.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 168.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 158.4
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 152.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 151.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.8
FF:10169-103B7 60 years, female 79.9
FF:10153-102I9 76 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.4
Pig sample Sample description nTPM
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 14.2
Min nTPM: 6.4
Sample A Female 12.5
Sample B Female 6.4
Sample C Male 8.7
Sample D Male 14.2
Dorsal hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 20.3
Min nTPM: 9.9
Sample A Female 20.3
Sample B Female 10.6
Sample C Male 16.8
Sample D Male 9.9
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 16.6
Min nTPM: 7.6
Sample A Female 11.5
Sample B Female 14.3
Sample C Male 16.6
Sample D Male 7.6
Ventral hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 16.3
Min nTPM: 9.4
Sample A Female 15.6
Sample B Female 9.4
Sample C Male 16.3
Sample D Male 11.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 19.7
Min nTPM: 14.2
Sample A Male 17.0
Sample B Male 19.1
Sample C Female 19.7
Sample D Female 14.2
Hippocampal formation
nTPM: 15.4
Samples: 4

Max nTPM: 19.5
Min nTPM: 11.6
Sample A Male 11.6
Sample B Male 13.2
Sample C Female 17.4
Sample D Female 19.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71608229 Antisense, RP_050927_01_D01, Mouse strain C57BL/6J (56 days, male) 0.4

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