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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
150.4
nTPM
Monaco:
301.7
nTPM
Schmiedel:
97.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
150.4
HPA sample
nTPM
gdT-cell nTPM: 139.2
Samples: 6
Max nTPM: 185.5
Min nTPM: 55.1
P10809_1007
149.7
P10809_1022
150.3
P10809_1041
185.5
P10809_1060
55.1
P10809_1077
149.2
P10809_1098
145.3
MAIT T-cell nTPM: 100.5
Samples: 6
Max nTPM: 123.0
Min nTPM: 64.1
P10809_1006
115.4
P10809_1024
69.8
P10809_1043
123.0
P10809_1062
64.1
P10809_1083
114.7
P10809_1097
116.0
Memory CD4 T-cell nTPM: 122.6
Samples: 6
Max nTPM: 172.4
Min nTPM: 53.0
P10809_1014
138.4
P10809_1026
143.8
P10809_1045
172.4
P10809_1064
142.6
P10809_1086
85.1
P10809_1113
53.0
Memory CD8 T-cell nTPM: 150.4
Samples: 5
Max nTPM: 197.9
Min nTPM: 113.9
P10809_1012
177.5
P10809_1027
113.9
P10809_1046
197.9
P10809_1065
131.7
P10809_1111
131.2
Naive CD4 T-cell nTPM: 108.2
Samples: 6
Max nTPM: 125.7
Min nTPM: 88.3
P10809_1015
103.3
P10809_1030
115.6
P10809_1049
125.7
P10809_1068
103.9
P10809_1085
112.1
P10809_1112
88.3
Naive CD8 T-cell nTPM: 104.3
Samples: 6
Max nTPM: 131.8
Min nTPM: 52.8
P10809_1016
109.4
P10809_1031
128.0
P10809_1050
104.3
P10809_1069
131.8
P10809_1087
52.8
P10809_1110
99.4
T-reg nTPM: 141.8
Samples: 6
Max nTPM: 186.2
Min nTPM: 63.2
P10809_1018
167.3
P10809_1037
164.3
P10809_1056
186.2
P10809_1075
127.5
P10809_1094
63.2
P10809_1106
142.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
301.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 207.5
Samples: 4
Max nTPM: 261.9
Min nTPM: 150.7
RHH5202_R3573
150.7
RHH5230_R3602
261.9
RHH5259_R3631
201.9
RHH5288_R3660
215.3
Effector memory CD8 T-cell nTPM: 290.8
Samples: 4
Max nTPM: 392.4
Min nTPM: 117.4
RHH5203_R3574
337.6
RHH5231_R3603
392.4
RHH5260_R3632
315.9
RHH5289_R3661
117.4
MAIT T-cell nTPM: 215.4
Samples: 4
Max nTPM: 311.6
Min nTPM: 150.2
RHH5233_R3605
150.2
RHH5205_R3576
210.4
RHH5262_R3634
311.6
RHH5297_R3663
189.4
Memory CD4 T-cell TFH nTPM: 257.3
Samples: 4
Max nTPM: 402.0
Min nTPM: 111.3
RHH5300_R3666
323.5
RHH5236_R3608
402.0
RHH5265_R3637
192.5
RHH5208_R3579
111.3
Memory CD4 T-cell Th1 nTPM: 233.9
Samples: 4
Max nTPM: 279.9
Min nTPM: 169.4
RHH5210_R3581
253.1
RHH5302_R3668
169.4
RHH5238_R3610
233.2
RHH5267_R3639
279.9
Memory CD4 T-cell Th1/Th17 nTPM: 213.8
Samples: 4
Max nTPM: 353.5
Min nTPM: 71.2
RHH5303_R3669
71.2
RHH5211_R3582
353.5
RHH5239_R3611
183.1
RHH5268_R3640
247.2
Memory CD4 T-cell Th17 nTPM: 204.5
Samples: 4
Max nTPM: 321.5
Min nTPM: 116.3
RHH5304_R3670
153.0
RHH5212_R3583
321.5
RHH5240_R3612
116.3
RHH5269_R3641
227.0
Memory CD4 T-cell Th2 nTPM: 284.1
Samples: 4
Max nTPM: 373.8
Min nTPM: 131.5
RHH5305_R3671
301.4
RHH5213_R3584
373.8
RHH5241_R3613
131.5
RHH5270_R3642
329.6
Naive CD4 T-cell nTPM: 240.6
Samples: 4
Max nTPM: 262.4
Min nTPM: 220.0
RHH5306_R3672
262.4
RHH5214_R3585
253.9
RHH5242_R3614
220.0
RHH5271_R3643
226.1
Naive CD8 T-cell nTPM: 163.7
Samples: 4
Max nTPM: 241.4
Min nTPM: 62.0
RHH5201_R3572
62.0
RHH5229_R3601
130.5
RHH5258_R3630
241.4
RHH5287_R3659
221.0
Non-Vd2 gdTCR nTPM: 301.7
Samples: 4
Max nTPM: 428.1
Min nTPM: 188.1
RHH5235_R3607
294.2
RHH5264_R3636
188.1
RHH5207_R3578
296.5
RHH5299_R3665
428.1
T-reg nTPM: 288.4
Samples: 4
Max nTPM: 333.2
Min nTPM: 269.5
RHH5301_R3667
269.5
RHH5237_R3609
333.2
RHH5266_R3638
272.6
RHH5209_R3580
278.2
Terminal effector memory CD4 T-cell nTPM: 239.1
Samples: 2
Max nTPM: 293.5
Min nTPM: 184.7
RHH5243_R3615
293.5
RHH5272_R3644
184.7
Terminal effector memory CD8 T-cell nTPM: 268.2
Samples: 4
Max nTPM: 349.4
Min nTPM: 147.1
RHH5232_R3604
268.7
RHH5204_R3575
349.4
RHH5261_R3633
307.5
RHH5296_R3662
147.1
Vd2 gdTCR nTPM: 272.1
Samples: 4
Max nTPM: 305.0
Min nTPM: 237.7
RHH5234_R3606
255.1
RHH5206_R3577
290.7
RHH5263_R3635
237.7
RHH5298_R3664
305.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
