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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.3
nTPM
Monaco:
62.7
nTPM
Schmiedel:
323.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.3
HPA sample
nTPM
gdT-cell nTPM: 54.8
Samples: 6
Max nTPM: 80.8
Min nTPM: 44.4
P10809_1007
44.4
P10809_1022
45.6
P10809_1041
61.3
P10809_1060
45.6
P10809_1077
50.9
P10809_1098
80.8
MAIT T-cell nTPM: 68.2
Samples: 6
Max nTPM: 102.3
Min nTPM: 52.1
P10809_1006
52.1
P10809_1024
77.5
P10809_1043
60.2
P10809_1062
58.9
P10809_1083
58.1
P10809_1097
102.3
Memory CD4 T-cell nTPM: 77.4
Samples: 6
Max nTPM: 91.7
Min nTPM: 68.3
P10809_1014
68.3
P10809_1026
91.7
P10809_1045
76.0
P10809_1064
71.4
P10809_1086
69.7
P10809_1113
87.4
Memory CD8 T-cell nTPM: 77.2
Samples: 5
Max nTPM: 99.3
Min nTPM: 62.0
P10809_1012
69.7
P10809_1027
86.8
P10809_1046
62.0
P10809_1065
68.2
P10809_1111
99.3
Naive CD4 T-cell nTPM: 72.2
Samples: 6
Max nTPM: 93.2
Min nTPM: 55.5
P10809_1015
56.1
P10809_1030
93.2
P10809_1049
68.3
P10809_1068
55.5
P10809_1085
78.3
P10809_1112
81.9
Naive CD8 T-cell nTPM: 73.1
Samples: 6
Max nTPM: 92.0
Min nTPM: 50.0
P10809_1016
50.0
P10809_1031
92.0
P10809_1050
78.8
P10809_1069
66.7
P10809_1087
68.3
P10809_1110
82.5
T-reg nTPM: 96.3
Samples: 6
Max nTPM: 122.2
Min nTPM: 76.2
P10809_1018
76.2
P10809_1037
102.6
P10809_1056
122.2
P10809_1075
76.8
P10809_1094
85.0
P10809_1106
115.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 40.9
Samples: 4
Max nTPM: 52.3
Min nTPM: 35.3
RHH5202_R3573
35.9
RHH5230_R3602
35.3
RHH5259_R3631
40.1
RHH5288_R3660
52.3
Effector memory CD8 T-cell nTPM: 62.1
Samples: 4
Max nTPM: 71.3
Min nTPM: 47.0
RHH5203_R3574
62.8
RHH5231_R3603
67.3
RHH5260_R3632
71.3
RHH5289_R3661
47.0
MAIT T-cell nTPM: 46.1
Samples: 4
Max nTPM: 52.8
Min nTPM: 35.4
RHH5233_R3605
46.2
RHH5205_R3576
35.4
RHH5262_R3634
49.9
RHH5297_R3663
52.8
Memory CD4 T-cell TFH nTPM: 50.5
Samples: 4
Max nTPM: 63.4
Min nTPM: 36.9
RHH5300_R3666
47.5
RHH5236_R3608
63.4
RHH5265_R3637
54.3
RHH5208_R3579
36.9
Memory CD4 T-cell Th1 nTPM: 48.5
Samples: 4
Max nTPM: 64.9
Min nTPM: 39.1
RHH5210_R3581
44.3
RHH5302_R3668
64.9
RHH5238_R3610
39.1
RHH5267_R3639
45.8
Memory CD4 T-cell Th1/Th17 nTPM: 54.1
Samples: 4
Max nTPM: 71.9
Min nTPM: 28.9
RHH5303_R3669
69.0
RHH5211_R3582
71.9
RHH5239_R3611
28.9
RHH5268_R3640
46.7
Memory CD4 T-cell Th17 nTPM: 54.3
Samples: 4
Max nTPM: 62.7
Min nTPM: 40.7
RHH5304_R3670
58.9
RHH5212_R3583
62.7
RHH5240_R3612
54.9
RHH5269_R3641
40.7
Memory CD4 T-cell Th2 nTPM: 62.7
Samples: 4
Max nTPM: 76.6
Min nTPM: 48.5
RHH5305_R3671
76.6
RHH5213_R3584
70.8
RHH5241_R3613
54.8
RHH5270_R3642
48.5
Naive CD4 T-cell nTPM: 54.8
Samples: 4
Max nTPM: 61.3
Min nTPM: 49.1
RHH5306_R3672
57.0
RHH5214_R3585
61.3
RHH5242_R3614
51.7
RHH5271_R3643
49.1
Naive CD8 T-cell nTPM: 51.5
Samples: 4
Max nTPM: 54.9
Min nTPM: 43.3
RHH5201_R3572
54.9
RHH5229_R3601
43.3
RHH5258_R3630
53.1
RHH5287_R3659
54.6
Non-Vd2 gdTCR nTPM: 49.2
Samples: 4
Max nTPM: 75.9
Min nTPM: 36.7
RHH5235_R3607
36.7
RHH5264_R3636
75.9
RHH5207_R3578
45.6
RHH5299_R3665
38.6
T-reg nTPM: 62.0
Samples: 4
Max nTPM: 97.2
Min nTPM: 44.8
RHH5301_R3667
57.7
RHH5237_R3609
97.2
RHH5266_R3638
48.2
RHH5209_R3580
44.8
Terminal effector memory CD4 T-cell nTPM: 47.9
Samples: 2
Max nTPM: 50.1
Min nTPM: 45.6
RHH5243_R3615
45.6
RHH5272_R3644
50.1
Terminal effector memory CD8 T-cell nTPM: 50.1
Samples: 4
Max nTPM: 55.2
Min nTPM: 44.6
RHH5232_R3604
44.6
RHH5204_R3575
48.7
RHH5261_R3633
55.2
RHH5296_R3662
51.7
Vd2 gdTCR nTPM: 55.5
Samples: 4
Max nTPM: 72.0
Min nTPM: 41.2
RHH5234_R3606
41.2
RHH5206_R3577
67.1
RHH5263_R3635
72.0
RHH5298_R3664
41.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
