HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:123.4 nTPM
HPA Brain:64.1 nTPM
GTEx:123.4 nTPM
FANTOM5:42.3 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:65.8 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012782
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.1
Sample id Sample description nTPM
Hippocampus
nTPM: 59.1
1898 Male, age 80, left hemisphere 76.6
2529 Female, age 94, left hemisphere 67.1
1855 Male, age 76, left hemisphere 57.4
1911 Female, age 85, right hemisphere 53.1
2148 Female, age 91, left hemisphere 51.4
2621 Female, age 67, right hemisphere 48.8
Dentate gyrus
nTPM: 59.3
2010 Male, age 76, both hemispheres 74.6
2528 Male, age 74, both hemispheres 68.3
2530 Female, age 94, left hemisphere 62.0
1927 Female, age 91, both hemispheres 54.4
2246 Female, age 85, both hemispheres 49.2
2531 Female, age 67, both hemispheres 47.3
Entorhinal gyrus
nTPM: 52.5
2117 Female, age 91, right hemisphere 62.1
2764 Male, age 80, right hemisphere 57.5
1787 Male, age 76, left hemisphere 55.0
2686 Male, age 75, right hemisphere 49.5
1938 Female, age 85, left hemisphere 49.3
2613 Female, age 94, left hemisphere 41.4
Hippocampus, CA1
nTPM: 60.0
2749 Male, age 80, left hemisphere 74.8
2082 Female, age 91, right hemisphere 58.3
2527 Male, age 74, both hemispheres 57.7
2045 Male, age 76, both hemispheres 56.7
1873 Female, age 85, both hemispheres 52.3
Hippocampus, CA2
nTPM: 64.1
1963 Male, age 80, left hemisphere 86.1
2249 Male, age 74, both hemispheres 75.1
1892 Male, age 76, both hemispheres 58.4
2437 Female, age 94, left hemisphere 56.3
2113 Female, age 91, right hemisphere 54.9
1940 Female, age 85, left hemisphere 53.9
Hippocampus, CA3
nTPM: 55.5
2436 Male, age 74, both hemispheres 80.3
1867 Male, age 76, both hemispheres 59.9
2137 Male, age 80, left hemisphere 52.5
1891 Female, age 85, both hemispheres 50.0
2620 Female, age 94, left hemisphere 46.6
2861 Female, age 67, both hemispheres 44.0
Parahippocampal cortex
nTPM: 49.5
2018 Male, age 76, both hemispheres 63.7
1933 Female, age 85, both hemispheres 56.7
1990 Female, age 91, right hemisphere 54.3
2250 Female, age 67, right hemisphere 54.1
2245 Female, age 91, both hemispheres 53.1
1850 Male, age 80, both hemispheres 50.7
2532 Female, age 72, left hemisphere 48.1
2622 Female, age 67, right hemisphere 43.0
2692 Male, age 74, both hemispheres 38.3
2693 Female, age 94, both hemispheres 32.7
Perirhinal gyrus
nTPM: 53.0
1794 Male, age 80, right hemisphere 64.5
1847 Female, age 91, left hemisphere 56.6
1841 Female, age 85, right hemisphere 53.4
2521 Female, age 94, right hemisphere 52.1
2848 Male, age 76, right hemisphere 38.6
Subiculum
nTPM: 55.0
1901 Male, age 80, both hemispheres 62.3
1977 Female, age 85, both hemispheres 59.2
2438 Female, age 94, left hemisphere 56.7
2042 Male, age 76, both hemispheres 54.2
2729 Female, age 91, right hemisphere 50.6
2619 Male, age 74, both hemispheres 47.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 123.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 123.4
Samples: 197

Max nTPM: 328.0
Min nTPM: 49.2
Std nTPM: 34.6
Median nTPM: 118.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 328.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 233.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 233.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 232.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 228.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 207.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 202.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 197.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 188.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 183.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 177.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.3
FF:10169-103B7 60 years, female 47.7
FF:10153-102I9 76 years, female 36.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.2
Pig sample Sample description nTPM
Subiculum
nTPM: 22.0
Samples: 4

Max nTPM: 30.2
Min nTPM: 17.3
Sample A Female 30.2
Sample B Female 20.6
Sample C Male 19.7
Sample D Male 17.3
Dorsal hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 35.6
Min nTPM: 21.6
Sample A Female 35.6
Sample B Female 25.5
Sample C Male 26.1
Sample D Male 21.6
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 27.0
Min nTPM: 17.1
Sample A Female 21.8
Sample B Female 27.0
Sample C Male 25.8
Sample D Male 17.1
Ventral hippocampus
nTPM: 25.2
Samples: 4

Max nTPM: 31.9
Min nTPM: 18.3
Sample A Female 26.4
Sample B Female 18.3
Sample C Male 31.9
Sample D Male 24.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.1
Samples: 4

Max nTPM: 66.7
Min nTPM: 52.4
Sample A Male 55.1
Sample B Male 66.7
Sample C Female 66.3
Sample D Female 52.4
Hippocampal formation
nTPM: 65.8
Samples: 4

Max nTPM: 74.4
Min nTPM: 59.4
Sample A Male 64.4
Sample B Male 59.4
Sample C Female 65.1
Sample D Female 74.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
70303761 Antisense, RP_050609_02_D07, Mouse strain C57BL/6J (56 days, male) 3.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org