HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:40.8 nTPM
HPA Brain:33.5 nTPM
GTEx:40.8 nTPM
FANTOM5:80.1 Scaled Tags Per Million
Mouse:80.7 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041436
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.5
Sample id Sample description nTPM
Hippocampus
nTPM: 31.5
2529 Female, age 94, left hemisphere 35.4
1898 Male, age 80, left hemisphere 35.0
1911 Female, age 85, right hemisphere 31.7
2148 Female, age 91, left hemisphere 30.1
1855 Male, age 76, left hemisphere 28.9
2621 Female, age 67, right hemisphere 27.8
Dentate gyrus
nTPM: 31.9
1927 Female, age 91, both hemispheres 34.9
2531 Female, age 67, both hemispheres 34.5
2010 Male, age 76, both hemispheres 33.0
2530 Female, age 94, left hemisphere 31.7
2246 Female, age 85, both hemispheres 30.3
2528 Male, age 74, both hemispheres 26.7
Entorhinal gyrus
nTPM: 32.2
1938 Female, age 85, left hemisphere 35.5
1787 Male, age 76, left hemisphere 33.9
2686 Male, age 75, right hemisphere 32.1
2764 Male, age 80, right hemisphere 32.1
2613 Female, age 94, left hemisphere 29.9
2117 Female, age 91, right hemisphere 29.6
Hippocampus, CA1
nTPM: 32.9
2749 Male, age 80, left hemisphere 41.8
1873 Female, age 85, both hemispheres 36.4
2527 Male, age 74, both hemispheres 31.2
2045 Male, age 76, both hemispheres 28.8
2082 Female, age 91, right hemisphere 26.5
Hippocampus, CA2
nTPM: 31.2
1963 Male, age 80, left hemisphere 37.9
1892 Male, age 76, both hemispheres 37.4
1940 Female, age 85, left hemisphere 29.4
2437 Female, age 94, left hemisphere 29.4
2113 Female, age 91, right hemisphere 26.8
2249 Male, age 74, both hemispheres 26.6
Hippocampus, CA3
nTPM: 32.1
2137 Male, age 80, left hemisphere 37.7
1891 Female, age 85, both hemispheres 36.2
1867 Male, age 76, both hemispheres 35.7
2861 Female, age 67, both hemispheres 29.7
2620 Female, age 94, left hemisphere 28.7
2436 Male, age 74, both hemispheres 24.5
Parahippocampal cortex
nTPM: 31.2
1850 Male, age 80, both hemispheres 38.9
1933 Female, age 85, both hemispheres 34.0
2018 Male, age 76, both hemispheres 32.4
1990 Female, age 91, right hemisphere 31.4
2532 Female, age 72, left hemisphere 31.3
2693 Female, age 94, both hemispheres 31.2
2245 Female, age 91, both hemispheres 29.5
2692 Male, age 74, both hemispheres 29.1
2250 Female, age 67, right hemisphere 28.6
2622 Female, age 67, right hemisphere 25.3
Perirhinal gyrus
nTPM: 33.5
1841 Female, age 85, right hemisphere 37.2
1794 Male, age 80, right hemisphere 35.1
2848 Male, age 76, right hemisphere 33.5
1847 Female, age 91, left hemisphere 33.0
2521 Female, age 94, right hemisphere 28.6
Subiculum
nTPM: 31.9
2438 Female, age 94, left hemisphere 37.6
1901 Male, age 80, both hemispheres 37.5
1977 Female, age 85, both hemispheres 31.8
2042 Male, age 76, both hemispheres 31.8
2729 Female, age 91, right hemisphere 27.6
2619 Male, age 74, both hemispheres 25.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.8
Samples: 197

Max nTPM: 57.4
Min nTPM: 30.3
Std nTPM: 4.8
Median nTPM: 40.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 57.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 55.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 53.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 51.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 50.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 50.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 49.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 49.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 49.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 49.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.1
FF:10169-103B7 60 years, female 91.3
FF:10153-102I9 76 years, female 68.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 80.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.9
Samples: 4

Max nTPM: 78.5
Min nTPM: 63.7
Sample A Male 70.9
Sample B Male 78.5
Sample C Female 74.4
Sample D Female 63.7
Hippocampal formation
nTPM: 80.7
Samples: 4

Max nTPM: 91.2
Min nTPM: 73.8
Sample A Male 91.2
Sample B Male 77.3
Sample C Female 80.3
Sample D Female 73.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
69817061 Antisense, RP_050510_02_E08, Mouse strain C57BL/6J (56 days, male) 9.7

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