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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
39.6
nTPM
HPA Brain:
32.6
nTPM
GTEx:
39.6
nTPM
FANTOM5:
73.5
Scaled Tags Per Million
Mouse:
73.6
nTPM
Allen mouse:
6.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
32.6
Sample id
Sample description
nTPM
Amygdala nTPM: 32.6
2695
Female, age 67, right hemisphere
37.1
2514
Male, age 75, right hemisphere
33.6
2814
Male, age 76, right hemisphere
33.6
1987
Female, age 91, left hemisphere
30.1
2517
Female, age 94, left hemisphere
28.6
Basal amygdala nTPM: 28.8
2827
Female, age 67, right hemisphere
30.2
2110
Male, age 80, left hemisphere
29.8
1955
Male, age 76, both hemispheres
29.1
2243
Female, age 91, right hemisphere
28.8
2609
Male, age 75, right hemisphere
28.1
2685
Female, age 94, left hemisphere
26.6
Central amygdala nTPM: 31.2
2515
Male, age 75, right hemisphere
33.4
1905
Male, age 76, both hemispheres
33.1
2826
Female, age 94, left hemisphere
31.8
2239
Male, age 80, left hemisphere
30.3
2701
Female, age 91, right hemisphere
27.6
Corticomedial amygdala nTPM: 30.4
2429
Female, age 94, left hemisphere
33.4
2240
Male, age 76, both hemispheres
32.5
2829
Male, age 80, left hemisphere
30.4
2428
Male, age 75, right hemisphere
29.6
2242
Female, age 91, right hemisphere
28.8
2535
Female, age 67, right hemisphere
27.6
Lateral amygdala nTPM: 32.3
2830
Female, age 67, right hemisphere
38.0
2516
Male, age 75, right hemisphere
37.4
2534
Female, age 94, left hemisphere
31.9
1883
Male, age 76, both hemispheres
31.8
2256
Male, age 80, left hemisphere
28.3
2255
Female, age 91, right hemisphere
26.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
39.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 39.6
Samples: 152
Max nTPM: 52.7
Min nTPM: 26.6
Std nTPM: 4.6
Median nTPM: 39.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
52.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
51.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
50.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
49.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
49.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
49.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
48.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
48.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
48.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
48.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
47.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
47.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
47.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
46.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
46.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
46.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
45.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
45.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
45.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
45.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
45.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
44.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
44.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
44.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
44.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
44.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
44.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
44.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
43.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
43.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
43.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
42.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
42.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
42.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
42.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
42.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
42.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
42.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
42.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
42.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
41.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
41.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
41.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
41.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
41.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
41.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
41.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
41.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
41.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
41.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
41.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
41.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
40.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
40.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
40.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
40.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
40.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
40.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
40.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
40.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
40.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
40.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
40.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
40.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
40.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
40.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
40.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
39.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
39.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
39.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
39.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
39.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
39.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
39.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
39.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
39.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
39.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
39.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
39.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
39.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
38.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
38.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
38.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
38.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
38.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
38.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
38.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
38.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
38.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
38.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
38.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
38.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
38.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
38.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
38.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
37.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
37.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
37.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
37.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
37.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
37.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
37.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
37.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
37.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
37.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
37.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
37.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
37.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
36.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
36.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
36.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
36.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
36.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
36.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
36.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
36.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
36.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
36.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
36.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
36.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
35.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
35.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
35.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
35.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
35.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
35.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
35.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
35.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
35.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
35.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
35.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
34.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
34.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
34.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
34.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
34.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
34.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
34.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
34.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
33.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
33.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
33.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
33.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
33.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
32.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
32.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
32.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
32.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
31.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
30.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
28.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
26.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
73.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 73.6
Samples: 4
Max nTPM: 76.8
Min nTPM: 67.9
Sample A
Male
76.6
Sample B
Male
76.8
Sample C
Female
67.9
Sample D
Female
73.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
