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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1588.1
nTPM
Monaco:
278.5
nTPM
Schmiedel:
82.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1588.1
HPA sample
nTPM
gdT-cell nTPM: 1588.1
Samples: 6
Max nTPM: 1861.1
Min nTPM: 1226.8
P10809_1007
1785.9
P10809_1022
1672.8
P10809_1041
1861.1
P10809_1060
1226.8
P10809_1077
1535.1
P10809_1098
1446.9
MAIT T-cell nTPM: 1175.3
Samples: 6
Max nTPM: 1308.8
Min nTPM: 1023.5
P10809_1006
1023.5
P10809_1024
1157.8
P10809_1043
1308.8
P10809_1062
1221.9
P10809_1083
1119.0
P10809_1097
1220.9
Memory CD4 T-cell nTPM: 667.0
Samples: 6
Max nTPM: 819.9
Min nTPM: 464.2
P10809_1014
464.2
P10809_1026
746.0
P10809_1045
626.4
P10809_1064
819.9
P10809_1086
789.9
P10809_1113
555.8
Memory CD8 T-cell nTPM: 1294.0
Samples: 5
Max nTPM: 1481.5
Min nTPM: 1033.7
P10809_1012
1096.3
P10809_1027
1442.9
P10809_1046
1481.5
P10809_1065
1415.5
P10809_1111
1033.7
Naive CD4 T-cell nTPM: 552.6
Samples: 6
Max nTPM: 657.3
Min nTPM: 419.8
P10809_1015
419.8
P10809_1030
637.9
P10809_1049
657.3
P10809_1068
515.6
P10809_1085
565.5
P10809_1112
519.3
Naive CD8 T-cell nTPM: 1111.8
Samples: 6
Max nTPM: 1305.9
Min nTPM: 843.7
P10809_1016
947.5
P10809_1031
1145.6
P10809_1050
1137.4
P10809_1069
1290.9
P10809_1087
1305.9
P10809_1110
843.7
T-reg nTPM: 631.9
Samples: 6
Max nTPM: 738.6
Min nTPM: 523.8
P10809_1018
523.8
P10809_1037
697.7
P10809_1056
738.6
P10809_1075
545.2
P10809_1094
704.5
P10809_1106
581.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
278.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 112.5
Samples: 4
Max nTPM: 188.3
Min nTPM: 39.3
RHH5202_R3573
39.3
RHH5230_R3602
109.2
RHH5259_R3631
188.3
RHH5288_R3660
113.0
Effector memory CD8 T-cell nTPM: 135.3
Samples: 4
Max nTPM: 272.6
Min nTPM: 67.4
RHH5203_R3574
91.5
RHH5231_R3603
67.4
RHH5260_R3632
272.6
RHH5289_R3661
109.8
MAIT T-cell nTPM: 148.3
Samples: 4
Max nTPM: 186.7
Min nTPM: 90.3
RHH5233_R3605
90.3
RHH5205_R3576
186.7
RHH5262_R3634
182.2
RHH5297_R3663
134.1
Memory CD4 T-cell TFH nTPM: 36.6
Samples: 4
Max nTPM: 43.7
Min nTPM: 22.6
RHH5300_R3666
40.2
RHH5236_R3608
43.7
RHH5265_R3637
39.9
RHH5208_R3579
22.6
Memory CD4 T-cell Th1 nTPM: 112.1
Samples: 4
Max nTPM: 171.4
Min nTPM: 30.0
RHH5210_R3581
30.0
RHH5302_R3668
104.2
RHH5238_R3610
171.4
RHH5267_R3639
142.6
Memory CD4 T-cell Th1/Th17 nTPM: 83.0
Samples: 4
Max nTPM: 114.3
Min nTPM: 45.4
RHH5303_R3669
73.8
RHH5211_R3582
45.4
RHH5239_R3611
98.3
RHH5268_R3640
114.3
Memory CD4 T-cell Th17 nTPM: 58.1
Samples: 4
Max nTPM: 103.9
Min nTPM: 37.4
RHH5304_R3670
103.9
RHH5212_R3583
45.3
RHH5240_R3612
45.9
RHH5269_R3641
37.4
Memory CD4 T-cell Th2 nTPM: 58.2
Samples: 4
Max nTPM: 105.0
Min nTPM: 38.5
RHH5305_R3671
105.0
RHH5213_R3584
39.1
RHH5241_R3613
38.5
RHH5270_R3642
50.3
Naive CD4 T-cell nTPM: 63.1
Samples: 4
Max nTPM: 98.5
Min nTPM: 36.8
RHH5306_R3672
98.5
RHH5214_R3585
60.1
RHH5242_R3614
36.8
RHH5271_R3643
56.8
Naive CD8 T-cell nTPM: 93.9
Samples: 4
Max nTPM: 138.1
Min nTPM: 46.6
RHH5201_R3572
46.6
RHH5229_R3601
135.9
RHH5258_R3630
54.8
RHH5287_R3659
138.1
Non-Vd2 gdTCR nTPM: 220.5
Samples: 4
Max nTPM: 283.5
Min nTPM: 156.0
RHH5235_R3607
283.5
RHH5264_R3636
165.1
RHH5207_R3578
156.0
RHH5299_R3665
277.4
T-reg nTPM: 58.2
Samples: 4
Max nTPM: 78.9
Min nTPM: 38.4
RHH5301_R3667
70.0
RHH5237_R3609
38.4
RHH5266_R3638
78.9
RHH5209_R3580
45.6
Terminal effector memory CD4 T-cell nTPM: 141.2
Samples: 2
Max nTPM: 187.8
Min nTPM: 94.5
RHH5243_R3615
187.8
RHH5272_R3644
94.5
Terminal effector memory CD8 T-cell nTPM: 256.1
Samples: 4
Max nTPM: 385.6
Min nTPM: 85.8
RHH5232_R3604
85.8
RHH5204_R3575
353.6
RHH5261_R3633
385.6
RHH5296_R3662
199.5
Vd2 gdTCR nTPM: 278.5
Samples: 4
Max nTPM: 479.0
Min nTPM: 124.4
RHH5234_R3606
124.4
RHH5206_R3577
479.0
RHH5263_R3635
237.2
RHH5298_R3664
273.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
