We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4611.8
nTPM
Monaco:
2352.7
nTPM
Schmiedel:
1140.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4611.8
HPA sample
nTPM
gdT-cell nTPM: 61.3
Samples: 6
Max nTPM: 125.4
Min nTPM: 17.8
P10809_1007
17.8
P10809_1022
104.3
P10809_1041
125.4
P10809_1060
54.0
P10809_1077
23.4
P10809_1098
42.8
MAIT T-cell nTPM: 69.3
Samples: 6
Max nTPM: 121.0
Min nTPM: 31.9
P10809_1006
49.8
P10809_1024
121.0
P10809_1043
63.6
P10809_1062
93.9
P10809_1083
31.9
P10809_1097
55.5
Memory CD4 T-cell nTPM: 998.9
Samples: 6
Max nTPM: 1528.9
Min nTPM: 539.7
P10809_1014
568.4
P10809_1026
1528.9
P10809_1045
1351.2
P10809_1064
686.9
P10809_1086
539.7
P10809_1113
1318.5
Memory CD8 T-cell nTPM: 285.5
Samples: 5
Max nTPM: 417.8
Min nTPM: 102.5
P10809_1012
295.3
P10809_1027
303.6
P10809_1046
308.2
P10809_1065
102.5
P10809_1111
417.8
Naive CD4 T-cell nTPM: 4611.8
Samples: 6
Max nTPM: 7132.9
Min nTPM: 1588.3
P10809_1015
1588.3
P10809_1030
4597.2
P10809_1049
7132.9
P10809_1068
5206.0
P10809_1085
4143.8
P10809_1112
5002.7
Naive CD8 T-cell nTPM: 2469.6
Samples: 6
Max nTPM: 4033.4
Min nTPM: 196.3
P10809_1016
1632.7
P10809_1031
3539.7
P10809_1050
2933.5
P10809_1069
2481.7
P10809_1087
196.3
P10809_1110
4033.4
T-reg nTPM: 639.0
Samples: 6
Max nTPM: 939.9
Min nTPM: 298.5
P10809_1018
298.5
P10809_1037
742.4
P10809_1056
939.9
P10809_1075
599.5
P10809_1094
650.3
P10809_1106
603.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2352.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 795.0
Samples: 4
Max nTPM: 918.7
Min nTPM: 620.2
RHH5202_R3573
825.9
RHH5230_R3602
918.7
RHH5259_R3631
620.2
RHH5288_R3660
815.2
Effector memory CD8 T-cell nTPM: 38.7
Samples: 4
Max nTPM: 52.2
Min nTPM: 21.3
RHH5203_R3574
30.6
RHH5231_R3603
21.3
RHH5260_R3632
50.8
RHH5289_R3661
52.2
MAIT T-cell nTPM: 34.1
Samples: 4
Max nTPM: 50.2
Min nTPM: 21.9
RHH5233_R3605
50.2
RHH5205_R3576
32.6
RHH5262_R3634
31.6
RHH5297_R3663
21.9
Memory CD4 T-cell TFH nTPM: 1076.3
Samples: 4
Max nTPM: 1178.1
Min nTPM: 1014.6
RHH5300_R3666
1055.9
RHH5236_R3608
1178.1
RHH5265_R3637
1014.6
RHH5208_R3579
1056.5
Memory CD4 T-cell Th1 nTPM: 1004.8
Samples: 4
Max nTPM: 1453.3
Min nTPM: 525.2
RHH5210_R3581
1453.3
RHH5302_R3668
1125.8
RHH5238_R3610
525.2
RHH5267_R3639
914.9
Memory CD4 T-cell Th1/Th17 nTPM: 437.0
Samples: 4
Max nTPM: 520.2
Min nTPM: 389.8
RHH5303_R3669
520.2
RHH5211_R3582
394.6
RHH5239_R3611
443.2
RHH5268_R3640
389.8
Memory CD4 T-cell Th17 nTPM: 481.5
Samples: 4
Max nTPM: 541.4
Min nTPM: 418.1
RHH5304_R3670
509.5
RHH5212_R3583
418.1
RHH5240_R3612
541.4
RHH5269_R3641
457.1
Memory CD4 T-cell Th2 nTPM: 647.6
Samples: 4
Max nTPM: 756.0
Min nTPM: 495.8
RHH5305_R3671
756.0
RHH5213_R3584
495.8
RHH5241_R3613
755.6
RHH5270_R3642
583.0
Naive CD4 T-cell nTPM: 2352.7
Samples: 4
Max nTPM: 2554.6
Min nTPM: 2116.0
RHH5306_R3672
2554.6
RHH5214_R3585
2116.0
RHH5242_R3614
2298.9
RHH5271_R3643
2441.3
Naive CD8 T-cell nTPM: 2215.8
Samples: 4
Max nTPM: 2625.9
Min nTPM: 1664.7
RHH5201_R3572
2231.9
RHH5229_R3601
1664.7
RHH5258_R3630
2340.8
RHH5287_R3659
2625.9
Non-Vd2 gdTCR nTPM: 86.6
Samples: 4
Max nTPM: 126.3
Min nTPM: 57.8
RHH5235_R3607
57.8
RHH5264_R3636
126.3
RHH5207_R3578
70.9
RHH5299_R3665
91.5
T-reg nTPM: 1027.8
Samples: 4
Max nTPM: 1128.4
Min nTPM: 930.1
RHH5301_R3667
964.2
RHH5237_R3609
1128.4
RHH5266_R3638
1088.6
RHH5209_R3580
930.1
Terminal effector memory CD4 T-cell nTPM: 222.0
Samples: 2
Max nTPM: 414.3
Min nTPM: 29.7
RHH5243_R3615
29.7
RHH5272_R3644
414.3
Terminal effector memory CD8 T-cell nTPM: 28.2
Samples: 4
Max nTPM: 58.0
Min nTPM: 6.8
RHH5232_R3604
22.8
RHH5204_R3575
6.8
RHH5261_R3633
58.0
RHH5296_R3662
25.3
Vd2 gdTCR nTPM: 215.6
Samples: 4
Max nTPM: 318.2
Min nTPM: 23.9
RHH5234_R3606
219.6
RHH5206_R3577
23.9
RHH5263_R3635
318.2
RHH5298_R3664
300.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
