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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
282.1
nTPM
FANTOM5:
295.8
Scaled Tags Per Million
Pig:
172.4
nTPM
Allen mouse:
6.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
282.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 192.1
2188
Female, age 91, both hemispheres
207.1
2301
Female, age 85, both hemispheres
192.7
2090
Male, age 80, both hemispheres
191.6
1984
Male, age 76, both hemispheres
177.1
Dorsal cochlear nucleus nTPM: 192.6
2187
Female, age 91, both hemispheres
224.3
2802
Male, age 74, right hemisphere
214.6
2370
Male, age 61, both hemispheres
185.1
2058
Male, age 76, both hemispheres
182.9
2378
Male, age 80, both hemispheres
156.4
Dorsal tegmental nucleus nTPM: 217.2
2083
Male, age 80, both hemispheres
257.8
2326
Male, age 74, both hemispheres
207.3
2358
Male, age 61, both hemispheres
207.0
1936
Male, age 76, left hemisphere
196.6
Dorsolateral tegmental area nTPM: 231.2
2360
Male, age 74, both hemispheres
285.5
2654
Male, age 80, both hemispheres
247.6
2141
Male, age 76, both hemispheres
225.8
2751
Female, age 85, both hemispheres
214.3
2337
Male, age 61, both hemispheres
183.0
Kolliker-Fuse nucleus nTPM: 239.7
2163
Male, age 80, both hemispheres
277.1
2793
Female, age 91, left hemisphere
227.5
2315
Male, age 76, right hemisphere
214.4
Lateral lemniscal nuclei nTPM: 232.3
2169
Male, age 76, both hemispheres
332.6
2746
Female, age 85, left hemisphere
265.4
2453
Male, age 74, right hemisphere
206.9
2036
Male, age 80, both hemispheres
199.9
2320
Female, age 91, left hemisphere
156.5
Lateral parabrachial nucleus nTPM: 225.8
2139
Female, age 85, right hemisphere
321.5
2013
Male, age 80, both hemispheres
222.5
2790
Male, age 61, both hemispheres
182.0
2792
Male, age 76, both hemispheres
177.0
Lateral vestibular nucleus nTPM: 245.8
2184
Male, age 76, both hemispheres
258.9
2311
Male, age 80, both hemispheres
232.7
Locus coeruleus nTPM: 282.1
2123
Female, age 91, both hemispheres
379.4
2014
Male, age 55, unknown
308.7
2720
Male, age 74, both hemispheres
291.5
2317
Female, age 72, unknown
261.1
1980
Male, age 76, both hemispheres
251.5
2788
Male, age 74, unknown
250.6
2162
Male, age 80, both hemispheres
232.0
Medial parabrachial nucleus nTPM: 233.3
2170
Female, age 91, both hemispheres
275.5
2854
Male, age 80, both hemispheres
273.3
2156
Male, age 61, both hemispheres
220.1
2786
Male, age 76, both hemispheres
213.2
2463
Female, age 85, right hemisphere
184.4
Medial periolivary nuclei nTPM: 232.6
2171
Female, age 85, both hemispheres
350.4
2063
Male, age 76, both hemispheres
287.7
2791
Male, age 74, right hemisphere
207.2
2081
Male, age 80, both hemispheres
159.5
2458
Female, age 91, both hemispheres
158.1
Motor facial nucleus nTPM: 239.8
2062
Male, age 76, both hemispheres
314.5
2697
Female, age 85, both hemispheres
267.7
2365
Male, age 74, right hemisphere
237.4
2327
Male, age 80, both hemispheres
210.1
2795
Female, age 91, both hemispheres
208.5
2126
Male, age 61, both hemispheres
200.8
Motor trigeminal nucleus nTPM: 210.0
2079
Male, age 80, both hemispheres
244.0
2335
Male, age 61, both hemispheres
226.9
2309
Male, age 76, both hemispheres
225.9
2560
Male, age 74, both hemispheres
191.2
2321
Female, age 91, both hemispheres
162.1
Nuclei of the trapezoid body nTPM: 256.4
1983
Male, age 76, both hemispheres
313.9
2159
Male, age 61, both hemispheres
307.5
2735
Female, age 85, both hemispheres
299.1
2166
Male, age 80, both hemispheres
208.2
2368
Female, age 91, both hemispheres
153.1
Nucleus raphe magnus nTPM: 274.9
2160
Male, age 61, both hemispheres
389.0
2172
Female, age 85, both hemispheres
371.4
2455
Male, age 74, both hemispheres
262.4
2051
Male, age 76, both hemispheres
249.9
2328
Male, age 80, both hemispheres
218.6
2459
Female, age 91, both hemispheres
158.5
Paramedian reticular nucleus nTPM: 248.6
2050
Female, age 85, both hemispheres
337.7
2313
Male, age 61, both hemispheres
232.9
2057
Male, age 80, both hemispheres
232.7
2052
Male, age 76, both hemispheres
191.3
Pedunculopontine tegmental nucleus nTPM: 230.7
2334
Male, age 80, both hemispheres
254.4
2338
Male, age 61, both hemispheres
226.3
1921
Female, age 85, both hemispheres
211.5
Pontine nuclei nTPM: 274.2
2787
Female, age 85, both hemispheres
464.3
1863
Male, age 55, unknown
359.3
2727
Male, age 61, right hemisphere
309.2
2109
Female, age 72, unknown
270.1
1968
Male, age 76, left hemisphere
261.0
2454
Male, age 74, left hemisphere
177.8
2115
Male, age 80, left hemisphere
177.5
2319
Female, age 91, both hemispheres
174.6
Pontine raphe nucleus nTPM: 266.5
2122
Female, age 85, midline
303.7
2853
Male, age 76, midline
229.3
Posteroventral cochlear nucleus nTPM: 199.0
2752
Female, age 85, both hemispheres
272.2
2070
Male, age 76, both hemispheres
217.4
2371
Male, age 61, both hemispheres
178.1
2341
Male, age 80, both hemispheres
176.0
2135
Female, age 91, both hemispheres
151.2
Principal sensory trigeminal nucleus nTPM: 250.0
2158
Male, age 61, both hemispheres
331.8
2008
Male, age 80, left hemisphere
257.4
2324
Male, age 76, both hemispheres
246.3
2367
Female, age 91, left hemisphere
164.7
Reticular pontine nucleus, caudal nTPM: 228.5
2092
Male, age 76, both hemispheres
290.7
2332
Male, age 80, right hemisphere
231.7
2559
Male, age 74, both hemispheres
198.5
2457
Female, age 91, both hemispheres
193.2
Reticular pontine nucleus, oral nTPM: 220.0
2012
Female, age 85, both hemispheres
284.2
1939
Male, age 80, both hemispheres
233.2
2167
Male, age 76, both hemispheres
226.3
2366
Female, age 91, both hemispheres
183.5
2361
Male, age 74, both hemispheres
172.6
Reticulotegmental nucleus nTPM: 222.8
2325
Male, age 76, both hemispheres
268.0
2322
Female, age 91, both hemispheres
218.4
2333
Male, age 80, both hemispheres
209.2
2452
Male, age 74, both hemispheres
195.5
Spinal trigeminal nucleus, oral nTPM: 231.7
2737
Female, age 85, both hemispheres
261.1
2164
Male, age 80, both hemispheres
245.5
1978
Male, age 76, both hemispheres
188.6
Subcoeruleus area nTPM: 231.5
2323
Female, age 91, left hemisphere
292.6
1958
Male, age 80, both hemispheres
281.3
2089
Male, age 76, left hemisphere
217.9
2451
Male, age 74, both hemispheres
187.7
2369
Female, age 85, left hemisphere
178.2
Superior olive nTPM: 228.7
1875
Female, age 85, both hemispheres
309.1
2020
Male, age 76, both hemispheres
251.8
2364
Male, age 74, right hemisphere
207.9
2329
Male, age 80, right hemisphere
197.5
2561
Female, age 91, both hemispheres
177.3
Ventral periolivary nuclei nTPM: 264.6
2130
Female, age 85, both hemispheres
326.1
2165
Male, age 80, both hemispheres
305.5
2023
Male, age 76, both hemispheres
237.7
2794
Female, age 91, left hemisphere
189.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 218.7
2840
Female, age 85, both hemispheres
314.6
1959
Male, age 76, both hemispheres
238.6
2449
Male, age 74, both hemispheres
237.3
2359
Male, age 61, both hemispheres
195.8
2161
Male, age 80, both hemispheres
194.8
2456
Female, age 91, both hemispheres
131.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
172.4
Pig sample
Sample description
nTPM
Pons nTPM: 172.4
Samples: 4
Max nTPM: 225.2
Min nTPM: 110.1
Sample A
Female
225.2
Sample B
Female
110.1
Sample C
Male
142.4
Sample D
Male
211.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
