HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:315.0 nTPM
HPA Brain:188.8 nTPM
GTEx:315.0 nTPM
FANTOM5:176.9 Scaled Tags Per Million
Pig:103.2 nTPM
Mouse:288.8 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037915Antibody HPA037916Antibody CAB008661
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 188.8
Sample id Sample description nTPM
Hippocampus
nTPM: 160.6
1898 Male, age 80, left hemisphere 203.6
2621 Female, age 67, right hemisphere 173.2
2529 Female, age 94, left hemisphere 173.0
1855 Male, age 76, left hemisphere 152.1
2148 Female, age 91, left hemisphere 149.1
1911 Female, age 85, right hemisphere 112.6
Dentate gyrus
nTPM: 157.5
2010 Male, age 76, both hemispheres 199.0
2530 Female, age 94, left hemisphere 189.6
1927 Female, age 91, both hemispheres 157.6
2246 Female, age 85, both hemispheres 146.8
2528 Male, age 74, both hemispheres 131.7
2531 Female, age 67, both hemispheres 120.6
Entorhinal gyrus
nTPM: 152.2
2764 Male, age 80, right hemisphere 183.7
1787 Male, age 76, left hemisphere 166.2
1938 Female, age 85, left hemisphere 158.7
2117 Female, age 91, right hemisphere 145.0
2686 Male, age 75, right hemisphere 139.2
2613 Female, age 94, left hemisphere 120.2
Hippocampus, CA1
nTPM: 177.6
2749 Male, age 80, left hemisphere 241.5
2082 Female, age 91, right hemisphere 172.2
2045 Male, age 76, both hemispheres 162.5
2527 Male, age 74, both hemispheres 162.0
1873 Female, age 85, both hemispheres 150.0
Hippocampus, CA2
nTPM: 182.4
2249 Male, age 74, both hemispheres 230.7
1892 Male, age 76, both hemispheres 197.5
1940 Female, age 85, left hemisphere 184.0
1963 Male, age 80, left hemisphere 174.2
2437 Female, age 94, left hemisphere 165.2
2113 Female, age 91, right hemisphere 143.1
Hippocampus, CA3
nTPM: 171.9
2436 Male, age 74, both hemispheres 293.3
1867 Male, age 76, both hemispheres 174.6
2137 Male, age 80, left hemisphere 160.4
2861 Female, age 67, both hemispheres 143.7
2620 Female, age 94, left hemisphere 131.0
1891 Female, age 85, both hemispheres 128.4
Parahippocampal cortex
nTPM: 166.0
1850 Male, age 80, both hemispheres 199.4
2245 Female, age 91, both hemispheres 197.0
2250 Female, age 67, right hemisphere 177.0
2532 Female, age 72, left hemisphere 170.5
2018 Male, age 76, both hemispheres 170.3
1933 Female, age 85, both hemispheres 163.5
1990 Female, age 91, right hemisphere 159.2
2622 Female, age 67, right hemisphere 155.4
2692 Male, age 74, both hemispheres 145.6
2693 Female, age 94, both hemispheres 121.7
Perirhinal gyrus
nTPM: 188.8
1794 Male, age 80, right hemisphere 229.8
1847 Female, age 91, left hemisphere 216.5
1841 Female, age 85, right hemisphere 172.7
2521 Female, age 94, right hemisphere 169.6
2848 Male, age 76, right hemisphere 155.3
Subiculum
nTPM: 147.1
2438 Female, age 94, left hemisphere 165.7
1901 Male, age 80, both hemispheres 163.2
1977 Female, age 85, both hemispheres 152.5
2619 Male, age 74, both hemispheres 146.0
2042 Male, age 76, both hemispheres 141.7
2729 Female, age 91, right hemisphere 113.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 315.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 315.0
Samples: 197

Max nTPM: 922.2
Min nTPM: 119.7
Std nTPM: 104.0
Median nTPM: 294.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 922.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 667.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 630.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 629.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 570.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 563.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 530.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 525.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 522.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 512.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 497.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 176.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.9
FF:10169-103B7 60 years, female 229.5
FF:10153-102I9 76 years, female 124.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 103.2
Pig sample Sample description nTPM
Subiculum
nTPM: 89.7
Samples: 4

Max nTPM: 151.3
Min nTPM: 55.8
Sample A Female 151.3
Sample B Female 80.7
Sample C Male 71.1
Sample D Male 55.8
Dorsal hippocampus
nTPM: 103.2
Samples: 4

Max nTPM: 167.1
Min nTPM: 64.7
Sample A Female 167.1
Sample B Female 86.3
Sample C Male 94.8
Sample D Male 64.7
Entorhinal cortex
nTPM: 94.8
Samples: 4

Max nTPM: 120.9
Min nTPM: 62.5
Sample A Female 120.9
Sample B Female 114.2
Sample C Male 81.7
Sample D Male 62.5
Ventral hippocampus
nTPM: 96.3
Samples: 4

Max nTPM: 136.0
Min nTPM: 66.3
Sample A Female 136.0
Sample B Female 71.2
Sample C Male 111.6
Sample D Male 66.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 288.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 247.2
Samples: 4

Max nTPM: 275.6
Min nTPM: 226.4
Sample A Male 240.6
Sample B Male 246.1
Sample C Female 275.6
Sample D Female 226.4
Hippocampal formation
nTPM: 288.8
Samples: 4

Max nTPM: 311.6
Min nTPM: 267.5
Sample A Male 311.6
Sample B Male 267.5
Sample C Female 279.8
Sample D Female 296.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
69817270 Antisense, RP_050510_03_A05, Mouse strain C57BL/6J (56 days, male) 7.8
76115740 Antisense, RP_060620_02_C08, Mouse strain C57BL/6J (56 days, male) 7.7

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