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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
298.0
nTPM
Monaco:
91.4
nTPM
Schmiedel:
186.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
298.0
HPA sample
nTPM
gdT-cell nTPM: 251.6
Samples: 6
Max nTPM: 325.9
Min nTPM: 162.5
P10809_1007
162.5
P10809_1022
257.3
P10809_1041
325.9
P10809_1060
166.1
P10809_1077
321.3
P10809_1098
276.7
MAIT T-cell nTPM: 218.7
Samples: 6
Max nTPM: 261.2
Min nTPM: 132.7
P10809_1006
132.7
P10809_1024
246.2
P10809_1043
252.4
P10809_1062
205.4
P10809_1083
214.5
P10809_1097
261.2
Memory CD4 T-cell nTPM: 229.7
Samples: 6
Max nTPM: 303.3
Min nTPM: 146.9
P10809_1014
146.9
P10809_1026
303.3
P10809_1045
227.1
P10809_1064
197.9
P10809_1086
237.0
P10809_1113
266.2
Memory CD8 T-cell nTPM: 205.2
Samples: 5
Max nTPM: 241.7
Min nTPM: 145.2
P10809_1012
145.2
P10809_1027
231.3
P10809_1046
236.2
P10809_1065
171.4
P10809_1111
241.7
Naive CD4 T-cell nTPM: 225.2
Samples: 6
Max nTPM: 293.7
Min nTPM: 135.0
P10809_1015
135.0
P10809_1030
265.1
P10809_1049
293.7
P10809_1068
215.4
P10809_1085
209.8
P10809_1112
232.1
Naive CD8 T-cell nTPM: 226.6
Samples: 6
Max nTPM: 266.5
Min nTPM: 173.6
P10809_1016
173.6
P10809_1031
266.5
P10809_1050
240.1
P10809_1069
231.0
P10809_1087
228.3
P10809_1110
220.3
T-reg nTPM: 298.0
Samples: 6
Max nTPM: 369.3
Min nTPM: 210.9
P10809_1018
210.9
P10809_1037
289.9
P10809_1056
369.3
P10809_1075
275.2
P10809_1094
305.0
P10809_1106
337.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 66.3
Samples: 4
Max nTPM: 109.2
Min nTPM: 45.1
RHH5202_R3573
45.1
RHH5230_R3602
61.3
RHH5259_R3631
49.6
RHH5288_R3660
109.2
Effector memory CD8 T-cell nTPM: 49.4
Samples: 4
Max nTPM: 57.2
Min nTPM: 44.0
RHH5203_R3574
44.0
RHH5231_R3603
48.3
RHH5260_R3632
57.2
RHH5289_R3661
48.1
MAIT T-cell nTPM: 62.5
Samples: 4
Max nTPM: 87.8
Min nTPM: 25.7
RHH5233_R3605
74.9
RHH5205_R3576
25.7
RHH5262_R3634
61.7
RHH5297_R3663
87.8
Memory CD4 T-cell TFH nTPM: 75.3
Samples: 4
Max nTPM: 141.5
Min nTPM: 41.0
RHH5300_R3666
75.8
RHH5236_R3608
141.5
RHH5265_R3637
41.0
RHH5208_R3579
42.8
Memory CD4 T-cell Th1 nTPM: 67.1
Samples: 4
Max nTPM: 116.2
Min nTPM: 25.9
RHH5210_R3581
25.9
RHH5302_R3668
116.2
RHH5238_R3610
72.9
RHH5267_R3639
53.2
Memory CD4 T-cell Th1/Th17 nTPM: 62.3
Samples: 4
Max nTPM: 98.0
Min nTPM: 43.6
RHH5303_R3669
98.0
RHH5211_R3582
43.6
RHH5239_R3611
55.0
RHH5268_R3640
52.5
Memory CD4 T-cell Th17 nTPM: 52.8
Samples: 4
Max nTPM: 63.1
Min nTPM: 42.1
RHH5304_R3670
63.1
RHH5212_R3583
57.5
RHH5240_R3612
48.4
RHH5269_R3641
42.1
Memory CD4 T-cell Th2 nTPM: 64.1
Samples: 4
Max nTPM: 72.9
Min nTPM: 57.9
RHH5305_R3671
62.8
RHH5213_R3584
57.9
RHH5241_R3613
72.9
RHH5270_R3642
62.9
Naive CD4 T-cell nTPM: 67.9
Samples: 4
Max nTPM: 107.8
Min nTPM: 43.2
RHH5306_R3672
68.5
RHH5214_R3585
107.8
RHH5242_R3614
52.1
RHH5271_R3643
43.2
Naive CD8 T-cell nTPM: 51.6
Samples: 4
Max nTPM: 64.2
Min nTPM: 39.1
RHH5201_R3572
39.1
RHH5229_R3601
48.4
RHH5258_R3630
64.2
RHH5287_R3659
54.5
Non-Vd2 gdTCR nTPM: 91.5
Samples: 4
Max nTPM: 178.7
Min nTPM: 48.8
RHH5235_R3607
60.2
RHH5264_R3636
78.1
RHH5207_R3578
48.8
RHH5299_R3665
178.7
T-reg nTPM: 75.6
Samples: 4
Max nTPM: 104.0
Min nTPM: 47.2
RHH5301_R3667
104.0
RHH5237_R3609
96.0
RHH5266_R3638
47.2
RHH5209_R3580
55.1
Terminal effector memory CD4 T-cell nTPM: 55.2
Samples: 2
Max nTPM: 63.1
Min nTPM: 47.2
RHH5243_R3615
47.2
RHH5272_R3644
63.1
Terminal effector memory CD8 T-cell nTPM: 85.6
Samples: 4
Max nTPM: 126.8
Min nTPM: 54.5
RHH5232_R3604
54.5
RHH5204_R3575
126.8
RHH5261_R3633
77.7
RHH5296_R3662
83.2
Vd2 gdTCR nTPM: 88.4
Samples: 4
Max nTPM: 124.8
Min nTPM: 62.6
RHH5234_R3606
62.6
RHH5206_R3577
100.2
RHH5263_R3635
65.9
RHH5298_R3664
124.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
