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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
129.9
nTPM
Monaco:
169.0
nTPM
Schmiedel:
218.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.9
HPA sample
nTPM
gdT-cell nTPM: 104.2
Samples: 6
Max nTPM: 148.6
Min nTPM: 67.0
P10809_1007
67.0
P10809_1022
112.6
P10809_1041
148.6
P10809_1060
100.6
P10809_1077
77.0
P10809_1098
119.5
MAIT T-cell nTPM: 129.9
Samples: 6
Max nTPM: 164.5
Min nTPM: 96.0
P10809_1006
96.0
P10809_1024
149.2
P10809_1043
164.5
P10809_1062
110.3
P10809_1083
104.5
P10809_1097
154.8
Memory CD4 T-cell nTPM: 95.7
Samples: 6
Max nTPM: 119.4
Min nTPM: 78.6
P10809_1014
78.6
P10809_1026
119.4
P10809_1045
104.4
P10809_1064
80.2
P10809_1086
89.5
P10809_1113
101.9
Memory CD8 T-cell nTPM: 111.0
Samples: 5
Max nTPM: 122.3
Min nTPM: 98.4
P10809_1012
98.4
P10809_1027
114.9
P10809_1046
122.3
P10809_1065
98.4
P10809_1111
121.0
Naive CD4 T-cell nTPM: 105.5
Samples: 6
Max nTPM: 147.1
Min nTPM: 65.4
P10809_1015
65.4
P10809_1030
104.2
P10809_1049
147.1
P10809_1068
83.3
P10809_1085
121.3
P10809_1112
111.9
Naive CD8 T-cell nTPM: 103.6
Samples: 6
Max nTPM: 122.7
Min nTPM: 91.2
P10809_1016
91.2
P10809_1031
97.6
P10809_1050
102.2
P10809_1069
122.7
P10809_1087
91.2
P10809_1110
116.7
T-reg nTPM: 98.0
Samples: 6
Max nTPM: 146.0
Min nTPM: 71.9
P10809_1018
73.6
P10809_1037
99.5
P10809_1056
146.0
P10809_1075
71.9
P10809_1094
92.1
P10809_1106
104.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
169.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 162.1
Samples: 4
Max nTPM: 232.9
Min nTPM: 116.4
RHH5202_R3573
232.9
RHH5230_R3602
126.9
RHH5259_R3631
116.4
RHH5288_R3660
172.2
Effector memory CD8 T-cell nTPM: 151.8
Samples: 4
Max nTPM: 170.5
Min nTPM: 110.2
RHH5203_R3574
170.5
RHH5231_R3603
168.5
RHH5260_R3632
110.2
RHH5289_R3661
158.0
MAIT T-cell nTPM: 154.3
Samples: 4
Max nTPM: 196.9
Min nTPM: 121.1
RHH5233_R3605
158.5
RHH5205_R3576
121.1
RHH5262_R3634
140.7
RHH5297_R3663
196.9
Memory CD4 T-cell TFH nTPM: 158.2
Samples: 4
Max nTPM: 190.9
Min nTPM: 121.9
RHH5300_R3666
145.5
RHH5236_R3608
190.9
RHH5265_R3637
121.9
RHH5208_R3579
174.5
Memory CD4 T-cell Th1 nTPM: 129.7
Samples: 4
Max nTPM: 174.2
Min nTPM: 96.0
RHH5210_R3581
174.2
RHH5302_R3668
148.4
RHH5238_R3610
96.0
RHH5267_R3639
100.3
Memory CD4 T-cell Th1/Th17 nTPM: 135.4
Samples: 4
Max nTPM: 185.0
Min nTPM: 72.3
RHH5303_R3669
185.0
RHH5211_R3582
170.2
RHH5239_R3611
72.3
RHH5268_R3640
114.1
Memory CD4 T-cell Th17 nTPM: 129.1
Samples: 4
Max nTPM: 160.2
Min nTPM: 87.1
RHH5304_R3670
151.3
RHH5212_R3583
160.2
RHH5240_R3612
117.6
RHH5269_R3641
87.1
Memory CD4 T-cell Th2 nTPM: 159.8
Samples: 4
Max nTPM: 183.0
Min nTPM: 116.3
RHH5305_R3671
183.0
RHH5213_R3584
159.7
RHH5241_R3613
180.2
RHH5270_R3642
116.3
Naive CD4 T-cell nTPM: 137.0
Samples: 4
Max nTPM: 179.8
Min nTPM: 105.0
RHH5306_R3672
128.0
RHH5214_R3585
179.8
RHH5242_R3614
135.3
RHH5271_R3643
105.0
Naive CD8 T-cell nTPM: 168.9
Samples: 4
Max nTPM: 244.9
Min nTPM: 66.8
RHH5201_R3572
244.9
RHH5229_R3601
66.8
RHH5258_R3630
199.3
RHH5287_R3659
164.7
Non-Vd2 gdTCR nTPM: 133.7
Samples: 4
Max nTPM: 153.7
Min nTPM: 83.6
RHH5235_R3607
83.6
RHH5264_R3636
143.8
RHH5207_R3578
153.7
RHH5299_R3665
153.7
T-reg nTPM: 130.9
Samples: 4
Max nTPM: 180.9
Min nTPM: 88.8
RHH5301_R3667
124.5
RHH5237_R3609
180.9
RHH5266_R3638
88.8
RHH5209_R3580
129.2
Terminal effector memory CD4 T-cell nTPM: 114.5
Samples: 2
Max nTPM: 135.8
Min nTPM: 93.1
RHH5243_R3615
93.1
RHH5272_R3644
135.8
Terminal effector memory CD8 T-cell nTPM: 162.3
Samples: 4
Max nTPM: 192.0
Min nTPM: 99.0
RHH5232_R3604
174.4
RHH5204_R3575
183.9
RHH5261_R3633
99.0
RHH5296_R3662
192.0
Vd2 gdTCR nTPM: 162.2
Samples: 4
Max nTPM: 181.8
Min nTPM: 116.6
RHH5234_R3606
181.8
RHH5206_R3577
179.5
RHH5263_R3635
116.6
RHH5298_R3664
170.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
