HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:36.8 nTPM
HPA Brain:120.2 nTPM
GTEx:36.8 nTPM
FANTOM5:33.1 Scaled Tags Per Million
Pig:32.1 nTPM
Mouse:60.1 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046828
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 120.2
Sample id Sample description nTPM
Hippocampus
nTPM: 108.2
2621 Female, age 67, right hemisphere 127.2
2529 Female, age 94, left hemisphere 120.8
2148 Female, age 91, left hemisphere 106.5
1898 Male, age 80, left hemisphere 103.3
1911 Female, age 85, right hemisphere 100.5
1855 Male, age 76, left hemisphere 90.9
Dentate gyrus
nTPM: 103.3
2530 Female, age 94, left hemisphere 120.3
2531 Female, age 67, both hemispheres 120.1
1927 Female, age 91, both hemispheres 99.8
2528 Male, age 74, both hemispheres 95.7
2010 Male, age 76, both hemispheres 93.8
2246 Female, age 85, both hemispheres 90.3
Entorhinal gyrus
nTPM: 120.2
2613 Female, age 94, left hemisphere 145.4
2764 Male, age 80, right hemisphere 130.6
2686 Male, age 75, right hemisphere 115.8
1787 Male, age 76, left hemisphere 111.2
1938 Female, age 85, left hemisphere 109.9
2117 Female, age 91, right hemisphere 108.1
Hippocampus, CA1
nTPM: 99.0
2749 Male, age 80, left hemisphere 122.2
2527 Male, age 74, both hemispheres 109.0
1873 Female, age 85, both hemispheres 92.5
2082 Female, age 91, right hemisphere 92.3
2045 Male, age 76, both hemispheres 78.8
Hippocampus, CA2
nTPM: 103.0
1963 Male, age 80, left hemisphere 117.8
2437 Female, age 94, left hemisphere 111.8
2249 Male, age 74, both hemispheres 101.2
2113 Female, age 91, right hemisphere 99.3
1940 Female, age 85, left hemisphere 94.2
1892 Male, age 76, both hemispheres 93.4
Hippocampus, CA3
nTPM: 101.6
2861 Female, age 67, both hemispheres 131.3
2620 Female, age 94, left hemisphere 115.2
2137 Male, age 80, left hemisphere 110.6
1867 Male, age 76, both hemispheres 87.0
1891 Female, age 85, both hemispheres 86.6
2436 Male, age 74, both hemispheres 79.1
Parahippocampal cortex
nTPM: 106.1
2622 Female, age 67, right hemisphere 128.9
2245 Female, age 91, both hemispheres 120.9
2532 Female, age 72, left hemisphere 110.7
1990 Female, age 91, right hemisphere 108.7
1933 Female, age 85, both hemispheres 107.4
2250 Female, age 67, right hemisphere 104.3
2692 Male, age 74, both hemispheres 96.6
1850 Male, age 80, both hemispheres 95.3
2693 Female, age 94, both hemispheres 94.4
2018 Male, age 76, both hemispheres 93.9
Perirhinal gyrus
nTPM: 107.6
1794 Male, age 80, right hemisphere 118.8
2521 Female, age 94, right hemisphere 112.3
1847 Female, age 91, left hemisphere 111.8
1841 Female, age 85, right hemisphere 100.0
2848 Male, age 76, right hemisphere 95.1
Subiculum
nTPM: 98.9
2619 Male, age 74, both hemispheres 108.9
1977 Female, age 85, both hemispheres 107.7
1901 Male, age 80, both hemispheres 99.1
2438 Female, age 94, left hemisphere 94.8
2042 Male, age 76, both hemispheres 94.7
2729 Female, age 91, right hemisphere 88.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.8
Samples: 197

Max nTPM: 83.4
Min nTPM: 11.0
Std nTPM: 10.7
Median nTPM: 35.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 83.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 65.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 63.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 59.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 59.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 59.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 57.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 56.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 54.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 54.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 54.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.1
FF:10153-102I9 76 years, female 36.1
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.1
Pig sample Sample description nTPM
Subiculum
nTPM: 29.1
Samples: 4

Max nTPM: 37.0
Min nTPM: 23.6
Sample A Female 37.0
Sample B Female 24.3
Sample C Male 31.5
Sample D Male 23.6
Dorsal hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 34.0
Min nTPM: 21.2
Sample A Female 34.0
Sample B Female 30.1
Sample C Male 27.4
Sample D Male 21.2
Entorhinal cortex
nTPM: 28.4
Samples: 4

Max nTPM: 33.1
Min nTPM: 24.1
Sample A Female 31.0
Sample B Female 24.1
Sample C Male 33.1
Sample D Male 25.4
Ventral hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 42.8
Min nTPM: 22.6
Sample A Female 29.1
Sample B Female 22.6
Sample C Male 42.8
Sample D Male 34.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.2
Samples: 4

Max nTPM: 64.2
Min nTPM: 54.7
Sample A Male 61.5
Sample B Male 60.2
Sample C Female 54.7
Sample D Female 64.2
Hippocampal formation
nTPM: 52.6
Samples: 4

Max nTPM: 54.9
Min nTPM: 48.6
Sample A Male 52.4
Sample B Male 54.9
Sample C Female 48.6
Sample D Female 54.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
73497253 Antisense, RP_051121_01_B11, Mouse strain C57BL/6J (56 days, male) 9.2

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