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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
75.1
nTPM
Monaco:
156.3
nTPM
Schmiedel:
798.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.1
HPA sample
nTPM
gdT-cell nTPM: 47.3
Samples: 6
Max nTPM: 59.4
Min nTPM: 37.8
P10809_1007
37.8
P10809_1022
59.4
P10809_1041
48.1
P10809_1060
46.6
P10809_1077
39.2
P10809_1098
52.7
MAIT T-cell nTPM: 62.0
Samples: 6
Max nTPM: 79.1
Min nTPM: 43.4
P10809_1006
52.8
P10809_1024
79.1
P10809_1043
43.4
P10809_1062
53.4
P10809_1083
65.0
P10809_1097
78.0
Memory CD4 T-cell nTPM: 61.1
Samples: 6
Max nTPM: 70.1
Min nTPM: 53.9
P10809_1014
60.1
P10809_1026
55.9
P10809_1045
61.8
P10809_1064
53.9
P10809_1086
64.6
P10809_1113
70.1
Memory CD8 T-cell nTPM: 56.2
Samples: 5
Max nTPM: 70.4
Min nTPM: 45.2
P10809_1012
51.2
P10809_1027
70.4
P10809_1046
45.2
P10809_1065
51.6
P10809_1111
62.8
Naive CD4 T-cell nTPM: 75.1
Samples: 6
Max nTPM: 82.2
Min nTPM: 65.5
P10809_1015
65.5
P10809_1030
82.2
P10809_1049
75.6
P10809_1068
79.5
P10809_1085
75.2
P10809_1112
72.5
Naive CD8 T-cell nTPM: 61.3
Samples: 6
Max nTPM: 83.1
Min nTPM: 49.5
P10809_1016
57.4
P10809_1031
83.1
P10809_1050
50.8
P10809_1069
49.5
P10809_1087
55.2
P10809_1110
72.0
T-reg nTPM: 55.8
Samples: 6
Max nTPM: 84.4
Min nTPM: 39.7
P10809_1018
42.3
P10809_1037
58.2
P10809_1056
39.7
P10809_1075
58.5
P10809_1094
51.8
P10809_1106
84.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 93.7
Samples: 4
Max nTPM: 146.0
Min nTPM: 58.9
RHH5202_R3573
146.0
RHH5230_R3602
82.8
RHH5259_R3631
58.9
RHH5288_R3660
86.9
Effector memory CD8 T-cell nTPM: 115.5
Samples: 4
Max nTPM: 209.2
Min nTPM: 67.4
RHH5203_R3574
209.2
RHH5231_R3603
96.5
RHH5260_R3632
67.4
RHH5289_R3661
88.8
MAIT T-cell nTPM: 126.4
Samples: 4
Max nTPM: 215.4
Min nTPM: 78.7
RHH5233_R3605
117.5
RHH5205_R3576
215.4
RHH5262_R3634
94.0
RHH5297_R3663
78.7
Memory CD4 T-cell TFH nTPM: 156.3
Samples: 4
Max nTPM: 278.4
Min nTPM: 70.5
RHH5300_R3666
70.5
RHH5236_R3608
148.6
RHH5265_R3637
127.5
RHH5208_R3579
278.4
Memory CD4 T-cell Th1 nTPM: 85.5
Samples: 4
Max nTPM: 125.3
Min nTPM: 47.6
RHH5210_R3581
125.3
RHH5302_R3668
110.5
RHH5238_R3610
58.6
RHH5267_R3639
47.6
Memory CD4 T-cell Th1/Th17 nTPM: 124.2
Samples: 4
Max nTPM: 212.1
Min nTPM: 61.0
RHH5303_R3669
146.4
RHH5211_R3582
212.1
RHH5239_R3611
61.0
RHH5268_R3640
77.3
Memory CD4 T-cell Th17 nTPM: 131.2
Samples: 4
Max nTPM: 204.1
Min nTPM: 74.4
RHH5304_R3670
90.5
RHH5212_R3583
204.1
RHH5240_R3612
155.7
RHH5269_R3641
74.4
Memory CD4 T-cell Th2 nTPM: 146.6
Samples: 4
Max nTPM: 249.6
Min nTPM: 88.6
RHH5305_R3671
124.3
RHH5213_R3584
249.6
RHH5241_R3613
123.8
RHH5270_R3642
88.6
Naive CD4 T-cell nTPM: 118.1
Samples: 4
Max nTPM: 148.9
Min nTPM: 96.8
RHH5306_R3672
116.5
RHH5214_R3585
110.3
RHH5242_R3614
148.9
RHH5271_R3643
96.8
Naive CD8 T-cell nTPM: 116.9
Samples: 4
Max nTPM: 132.7
Min nTPM: 92.5
RHH5201_R3572
119.3
RHH5229_R3601
92.5
RHH5258_R3630
132.7
RHH5287_R3659
123.2
Non-Vd2 gdTCR nTPM: 116.4
Samples: 4
Max nTPM: 211.2
Min nTPM: 53.6
RHH5235_R3607
110.0
RHH5264_R3636
53.6
RHH5207_R3578
211.2
RHH5299_R3665
90.8
T-reg nTPM: 143.8
Samples: 4
Max nTPM: 238.6
Min nTPM: 79.7
RHH5301_R3667
98.3
RHH5237_R3609
158.5
RHH5266_R3638
79.7
RHH5209_R3580
238.6
Terminal effector memory CD4 T-cell nTPM: 92.4
Samples: 2
Max nTPM: 102.3
Min nTPM: 82.4
RHH5243_R3615
82.4
RHH5272_R3644
102.3
Terminal effector memory CD8 T-cell nTPM: 106.6
Samples: 4
Max nTPM: 182.4
Min nTPM: 70.8
RHH5232_R3604
70.8
RHH5204_R3575
182.4
RHH5261_R3633
98.0
RHH5296_R3662
75.3
Vd2 gdTCR nTPM: 124.0
Samples: 4
Max nTPM: 202.1
Min nTPM: 81.4
RHH5234_R3606
107.6
RHH5206_R3577
202.1
RHH5263_R3635
105.0
RHH5298_R3664
81.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
