HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:160.3 nTPM
HPA Brain:129.5 nTPM
GTEx:160.3 nTPM
FANTOM5:141.4 Scaled Tags Per Million
Pig:24.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005543
Glial cells Low
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 129.5
Sample id Sample description nTPM
Hippocampus
nTPM: 124.5
2148 Female, age 91, left hemisphere 176.1
1898 Male, age 80, left hemisphere 154.6
2529 Female, age 94, left hemisphere 123.4
1855 Male, age 76, left hemisphere 123.2
2621 Female, age 67, right hemisphere 97.6
1911 Female, age 85, right hemisphere 72.0
Dentate gyrus
nTPM: 124.7
1927 Female, age 91, both hemispheres 168.3
2530 Female, age 94, left hemisphere 130.7
2010 Male, age 76, both hemispheres 130.4
2531 Female, age 67, both hemispheres 121.7
2528 Male, age 74, both hemispheres 102.9
2246 Female, age 85, both hemispheres 94.1
Entorhinal gyrus
nTPM: 105.3
2764 Male, age 80, right hemisphere 172.9
2117 Female, age 91, right hemisphere 124.0
1787 Male, age 76, left hemisphere 108.0
2686 Male, age 75, right hemisphere 96.3
1938 Female, age 85, left hemisphere 65.8
2613 Female, age 94, left hemisphere 64.9
Hippocampus, CA1
nTPM: 129.5
2045 Male, age 76, both hemispheres 195.9
1873 Female, age 85, both hemispheres 129.3
2749 Male, age 80, left hemisphere 124.6
2082 Female, age 91, right hemisphere 119.0
2527 Male, age 74, both hemispheres 78.9
Hippocampus, CA2
nTPM: 119.1
1963 Male, age 80, left hemisphere 148.9
2249 Male, age 74, both hemispheres 137.2
1892 Male, age 76, both hemispheres 125.2
2437 Female, age 94, left hemisphere 113.4
2113 Female, age 91, right hemisphere 100.5
1940 Female, age 85, left hemisphere 89.6
Hippocampus, CA3
nTPM: 106.7
2861 Female, age 67, both hemispheres 138.8
1867 Male, age 76, both hemispheres 122.8
2620 Female, age 94, left hemisphere 119.9
2436 Male, age 74, both hemispheres 96.0
2137 Male, age 80, left hemisphere 86.1
1891 Female, age 85, both hemispheres 76.3
Parahippocampal cortex
nTPM: 85.8
2018 Male, age 76, both hemispheres 116.9
1850 Male, age 80, both hemispheres 105.8
2245 Female, age 91, both hemispheres 98.2
1990 Female, age 91, right hemisphere 90.5
2532 Female, age 72, left hemisphere 89.4
1933 Female, age 85, both hemispheres 81.9
2250 Female, age 67, right hemisphere 78.6
2622 Female, age 67, right hemisphere 77.1
2692 Male, age 74, both hemispheres 65.2
2693 Female, age 94, both hemispheres 54.6
Perirhinal gyrus
nTPM: 96.6
2848 Male, age 76, right hemisphere 120.7
1794 Male, age 80, right hemisphere 115.0
1847 Female, age 91, left hemisphere 96.1
2521 Female, age 94, right hemisphere 76.2
1841 Female, age 85, right hemisphere 75.1
Subiculum
nTPM: 88.8
2729 Female, age 91, right hemisphere 128.5
2042 Male, age 76, both hemispheres 99.3
2438 Female, age 94, left hemisphere 88.1
1901 Male, age 80, both hemispheres 76.9
1977 Female, age 85, both hemispheres 75.7
2619 Male, age 74, both hemispheres 64.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 160.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 160.3
Samples: 197

Max nTPM: 2224.5
Min nTPM: 38.0
Std nTPM: 199.2
Median nTPM: 123.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 2224.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 1571.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 806.8
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 566.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 563.0
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 431.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 360.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 327.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 310.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 303.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 276.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 141.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.4
FF:10169-103B7 60 years, female 228.4
FF:10153-102I9 76 years, female 54.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.7
Pig sample Sample description nTPM
Subiculum
nTPM: 24.1
Samples: 4

Max nTPM: 42.6
Min nTPM: 10.9
Sample A Female 42.6
Sample B Female 10.9
Sample C Male 14.0
Sample D Male 28.7
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 36.1
Min nTPM: 15.8
Sample A Female 36.1
Sample B Female 15.8
Sample C Male 22.8
Sample D Male 22.7
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 38.5
Min nTPM: 15.8
Sample A Female 38.5
Sample B Female 15.8
Sample C Male 17.7
Sample D Male 18.2
Ventral hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 42.7
Min nTPM: 8.9
Sample A Female 42.7
Sample B Female 8.9
Sample C Male 24.8
Sample D Male 22.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org