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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
304.3
nTPM
Monaco:
91.7
nTPM
Schmiedel:
330.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
304.3
HPA sample
nTPM
gdT-cell nTPM: 170.0
Samples: 6
Max nTPM: 192.2
Min nTPM: 140.4
P10809_1007
192.2
P10809_1022
153.4
P10809_1041
191.3
P10809_1060
140.4
P10809_1077
174.5
P10809_1098
167.9
MAIT T-cell nTPM: 230.3
Samples: 6
Max nTPM: 282.0
Min nTPM: 198.3
P10809_1006
198.3
P10809_1024
234.4
P10809_1043
200.1
P10809_1062
255.7
P10809_1083
211.4
P10809_1097
282.0
Memory CD4 T-cell nTPM: 243.3
Samples: 6
Max nTPM: 299.4
Min nTPM: 179.9
P10809_1014
270.6
P10809_1026
278.9
P10809_1045
299.4
P10809_1064
191.1
P10809_1086
179.9
P10809_1113
240.0
Memory CD8 T-cell nTPM: 184.3
Samples: 5
Max nTPM: 215.6
Min nTPM: 152.2
P10809_1012
193.2
P10809_1027
187.6
P10809_1046
215.6
P10809_1065
152.2
P10809_1111
172.9
Naive CD4 T-cell nTPM: 304.3
Samples: 6
Max nTPM: 355.9
Min nTPM: 243.0
P10809_1015
311.5
P10809_1030
312.3
P10809_1049
355.9
P10809_1068
321.7
P10809_1085
243.0
P10809_1112
281.2
Naive CD8 T-cell nTPM: 256.2
Samples: 6
Max nTPM: 410.6
Min nTPM: 162.9
P10809_1016
410.6
P10809_1031
214.9
P10809_1050
273.8
P10809_1069
205.0
P10809_1087
162.9
P10809_1110
269.9
T-reg nTPM: 249.0
Samples: 6
Max nTPM: 311.0
Min nTPM: 212.5
P10809_1018
212.5
P10809_1037
242.1
P10809_1056
311.0
P10809_1075
220.2
P10809_1094
276.6
P10809_1106
231.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 64.6
Samples: 4
Max nTPM: 93.4
Min nTPM: 31.3
RHH5202_R3573
31.3
RHH5230_R3602
62.0
RHH5259_R3631
93.4
RHH5288_R3660
71.5
Effector memory CD8 T-cell nTPM: 39.6
Samples: 4
Max nTPM: 67.6
Min nTPM: 25.8
RHH5203_R3574
35.8
RHH5231_R3603
25.8
RHH5260_R3632
67.6
RHH5289_R3661
29.3
MAIT T-cell nTPM: 59.5
Samples: 4
Max nTPM: 71.8
Min nTPM: 44.1
RHH5233_R3605
44.1
RHH5205_R3576
51.1
RHH5262_R3634
71.0
RHH5297_R3663
71.8
Memory CD4 T-cell TFH nTPM: 53.1
Samples: 4
Max nTPM: 70.7
Min nTPM: 34.3
RHH5300_R3666
70.7
RHH5236_R3608
65.0
RHH5265_R3637
42.5
RHH5208_R3579
34.3
Memory CD4 T-cell Th1 nTPM: 81.9
Samples: 4
Max nTPM: 122.1
Min nTPM: 32.3
RHH5210_R3581
32.3
RHH5302_R3668
87.0
RHH5238_R3610
122.1
RHH5267_R3639
86.1
Memory CD4 T-cell Th1/Th17 nTPM: 71.9
Samples: 4
Max nTPM: 112.5
Min nTPM: 37.9
RHH5303_R3669
67.3
RHH5211_R3582
37.9
RHH5239_R3611
69.9
RHH5268_R3640
112.5
Memory CD4 T-cell Th17 nTPM: 74.0
Samples: 4
Max nTPM: 104.1
Min nTPM: 48.5
RHH5304_R3670
104.1
RHH5212_R3583
48.5
RHH5240_R3612
68.7
RHH5269_R3641
74.7
Memory CD4 T-cell Th2 nTPM: 75.4
Samples: 4
Max nTPM: 113.2
Min nTPM: 45.0
RHH5305_R3671
113.2
RHH5213_R3584
45.0
RHH5241_R3613
85.0
RHH5270_R3642
58.4
Naive CD4 T-cell nTPM: 91.8
Samples: 4
Max nTPM: 106.8
Min nTPM: 62.3
RHH5306_R3672
106.8
RHH5214_R3585
97.4
RHH5242_R3614
62.3
RHH5271_R3643
100.5
Naive CD8 T-cell nTPM: 87.3
Samples: 4
Max nTPM: 108.6
Min nTPM: 62.7
RHH5201_R3572
62.7
RHH5229_R3601
108.6
RHH5258_R3630
75.0
RHH5287_R3659
103.0
Non-Vd2 gdTCR nTPM: 60.2
Samples: 4
Max nTPM: 72.4
Min nTPM: 46.9
RHH5235_R3607
72.4
RHH5264_R3636
46.9
RHH5207_R3578
51.7
RHH5299_R3665
69.9
T-reg nTPM: 74.2
Samples: 4
Max nTPM: 97.5
Min nTPM: 48.8
RHH5301_R3667
97.5
RHH5237_R3609
48.8
RHH5266_R3638
79.4
RHH5209_R3580
71.0
Terminal effector memory CD4 T-cell nTPM: 48.5
Samples: 2
Max nTPM: 49.9
Min nTPM: 47.1
RHH5243_R3615
49.9
RHH5272_R3644
47.1
Terminal effector memory CD8 T-cell nTPM: 65.0
Samples: 4
Max nTPM: 112.8
Min nTPM: 30.2
RHH5232_R3604
30.2
RHH5204_R3575
112.8
RHH5261_R3633
71.0
RHH5296_R3662
45.8
Vd2 gdTCR nTPM: 79.0
Samples: 4
Max nTPM: 117.8
Min nTPM: 43.6
RHH5234_R3606
43.6
RHH5206_R3577
117.8
RHH5263_R3635
74.7
RHH5298_R3664
79.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
