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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
87.9
nTPM
Monaco:
40.3
nTPM
Schmiedel:
46.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.9
HPA sample
nTPM
gdT-cell nTPM: 76.2
Samples: 6
Max nTPM: 90.3
Min nTPM: 60.4
P10809_1007
60.4
P10809_1022
87.4
P10809_1041
90.3
P10809_1060
72.0
P10809_1077
62.3
P10809_1098
84.9
MAIT T-cell nTPM: 87.9
Samples: 6
Max nTPM: 111.3
Min nTPM: 60.4
P10809_1006
60.4
P10809_1024
111.3
P10809_1043
95.9
P10809_1062
82.1
P10809_1083
88.6
P10809_1097
89.0
Memory CD4 T-cell nTPM: 76.8
Samples: 6
Max nTPM: 86.1
Min nTPM: 61.2
P10809_1014
61.2
P10809_1026
85.5
P10809_1045
72.1
P10809_1064
86.1
P10809_1086
74.8
P10809_1113
80.8
Memory CD8 T-cell nTPM: 87.2
Samples: 5
Max nTPM: 103.9
Min nTPM: 75.7
P10809_1012
76.6
P10809_1027
86.7
P10809_1046
93.2
P10809_1065
75.7
P10809_1111
103.9
Naive CD4 T-cell nTPM: 73.8
Samples: 6
Max nTPM: 109.3
Min nTPM: 46.5
P10809_1015
46.5
P10809_1030
74.3
P10809_1049
109.3
P10809_1068
73.1
P10809_1085
64.2
P10809_1112
75.3
Naive CD8 T-cell nTPM: 68.1
Samples: 6
Max nTPM: 81.1
Min nTPM: 57.8
P10809_1016
57.8
P10809_1031
60.6
P10809_1050
76.5
P10809_1069
81.1
P10809_1087
70.8
P10809_1110
62.0
T-reg nTPM: 85.0
Samples: 6
Max nTPM: 110.5
Min nTPM: 56.8
P10809_1018
56.8
P10809_1037
88.6
P10809_1056
89.2
P10809_1075
110.5
P10809_1094
77.6
P10809_1106
87.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 24.3
Samples: 4
Max nTPM: 31.0
Min nTPM: 15.0
RHH5202_R3573
15.0
RHH5230_R3602
21.3
RHH5259_R3631
29.9
RHH5288_R3660
31.0
Effector memory CD8 T-cell nTPM: 24.9
Samples: 4
Max nTPM: 30.2
Min nTPM: 19.8
RHH5203_R3574
30.2
RHH5231_R3603
23.2
RHH5260_R3632
26.3
RHH5289_R3661
19.8
MAIT T-cell nTPM: 28.9
Samples: 4
Max nTPM: 46.6
Min nTPM: 21.5
RHH5233_R3605
24.0
RHH5205_R3576
23.6
RHH5262_R3634
21.5
RHH5297_R3663
46.6
Memory CD4 T-cell TFH nTPM: 25.0
Samples: 4
Max nTPM: 35.7
Min nTPM: 15.6
RHH5300_R3666
25.9
RHH5236_R3608
35.7
RHH5265_R3637
22.9
RHH5208_R3579
15.6
Memory CD4 T-cell Th1 nTPM: 30.3
Samples: 4
Max nTPM: 50.7
Min nTPM: 16.3
RHH5210_R3581
23.5
RHH5302_R3668
50.7
RHH5238_R3610
16.3
RHH5267_R3639
30.7
Memory CD4 T-cell Th1/Th17 nTPM: 27.3
Samples: 4
Max nTPM: 42.1
Min nTPM: 10.7
RHH5303_R3669
42.1
RHH5211_R3582
36.2
RHH5239_R3611
10.7
RHH5268_R3640
20.2
Memory CD4 T-cell Th17 nTPM: 21.0
Samples: 4
Max nTPM: 27.5
Min nTPM: 17.5
RHH5304_R3670
18.1
RHH5212_R3583
27.5
RHH5240_R3612
17.5
RHH5269_R3641
21.0
Memory CD4 T-cell Th2 nTPM: 17.8
Samples: 4
Max nTPM: 27.4
Min nTPM: 10.8
RHH5305_R3671
27.4
RHH5213_R3584
19.1
RHH5241_R3613
10.8
RHH5270_R3642
14.0
Naive CD4 T-cell nTPM: 28.6
Samples: 4
Max nTPM: 43.3
Min nTPM: 14.9
RHH5306_R3672
43.3
RHH5214_R3585
40.7
RHH5242_R3614
15.3
RHH5271_R3643
14.9
Naive CD8 T-cell nTPM: 17.9
Samples: 4
Max nTPM: 24.8
Min nTPM: 9.5
RHH5201_R3572
14.4
RHH5229_R3601
9.5
RHH5258_R3630
22.7
RHH5287_R3659
24.8
Non-Vd2 gdTCR nTPM: 30.5
Samples: 4
Max nTPM: 41.1
Min nTPM: 21.6
RHH5235_R3607
22.9
RHH5264_R3636
41.1
RHH5207_R3578
21.6
RHH5299_R3665
36.2
T-reg nTPM: 25.3
Samples: 4
Max nTPM: 38.4
Min nTPM: 15.2
RHH5301_R3667
38.4
RHH5237_R3609
26.7
RHH5266_R3638
15.2
RHH5209_R3580
20.7
Terminal effector memory CD4 T-cell nTPM: 24.9
Samples: 2
Max nTPM: 25.3
Min nTPM: 24.5
RHH5243_R3615
24.5
RHH5272_R3644
25.3
Terminal effector memory CD8 T-cell nTPM: 40.3
Samples: 4
Max nTPM: 58.7
Min nTPM: 32.5
RHH5232_R3604
33.9
RHH5204_R3575
58.7
RHH5261_R3633
32.5
RHH5296_R3662
36.0
Vd2 gdTCR nTPM: 34.9
Samples: 4
Max nTPM: 49.4
Min nTPM: 24.2
RHH5234_R3606
30.0
RHH5206_R3577
35.9
RHH5263_R3635
24.2
RHH5298_R3664
49.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
