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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.5
nTPM
Monaco:
264.3
nTPM
Schmiedel:
221.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.5
HPA sample
nTPM
gdT-cell nTPM: 18.6
Samples: 6
Max nTPM: 21.8
Min nTPM: 11.7
P10809_1007
18.7
P10809_1022
20.9
P10809_1041
19.2
P10809_1060
19.5
P10809_1077
21.8
P10809_1098
11.7
MAIT T-cell nTPM: 21.3
Samples: 6
Max nTPM: 29.9
Min nTPM: 13.6
P10809_1006
27.8
P10809_1024
29.9
P10809_1043
13.6
P10809_1062
23.4
P10809_1083
16.2
P10809_1097
17.0
Memory CD4 T-cell nTPM: 16.6
Samples: 6
Max nTPM: 18.6
Min nTPM: 13.7
P10809_1014
18.6
P10809_1026
17.4
P10809_1045
16.3
P10809_1064
13.7
P10809_1086
17.8
P10809_1113
15.6
Memory CD8 T-cell nTPM: 20.7
Samples: 5
Max nTPM: 29.5
Min nTPM: 15.0
P10809_1012
29.5
P10809_1027
19.8
P10809_1046
15.0
P10809_1065
17.6
P10809_1111
21.6
Naive CD4 T-cell nTPM: 16.8
Samples: 6
Max nTPM: 20.9
Min nTPM: 10.6
P10809_1015
20.9
P10809_1030
15.5
P10809_1049
10.6
P10809_1068
19.3
P10809_1085
16.8
P10809_1112
17.5
Naive CD8 T-cell nTPM: 20.8
Samples: 6
Max nTPM: 24.5
Min nTPM: 15.0
P10809_1016
24.5
P10809_1031
21.6
P10809_1050
15.0
P10809_1069
23.7
P10809_1087
21.8
P10809_1110
18.2
T-reg nTPM: 25.5
Samples: 6
Max nTPM: 29.6
Min nTPM: 18.5
P10809_1018
24.7
P10809_1037
29.6
P10809_1056
18.5
P10809_1075
27.0
P10809_1094
28.9
P10809_1106
24.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
264.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 162.1
Samples: 4
Max nTPM: 184.0
Min nTPM: 129.9
RHH5202_R3573
184.0
RHH5230_R3602
178.7
RHH5259_R3631
155.6
RHH5288_R3660
129.9
Effector memory CD8 T-cell nTPM: 221.6
Samples: 4
Max nTPM: 279.0
Min nTPM: 179.1
RHH5203_R3574
279.0
RHH5231_R3603
227.9
RHH5260_R3632
179.1
RHH5289_R3661
200.3
MAIT T-cell nTPM: 186.0
Samples: 4
Max nTPM: 262.8
Min nTPM: 126.8
RHH5233_R3605
205.3
RHH5205_R3576
262.8
RHH5262_R3634
148.9
RHH5297_R3663
126.8
Memory CD4 T-cell TFH nTPM: 125.1
Samples: 4
Max nTPM: 188.2
Min nTPM: 93.3
RHH5300_R3666
93.3
RHH5236_R3608
109.6
RHH5265_R3637
109.4
RHH5208_R3579
188.2
Memory CD4 T-cell Th1 nTPM: 114.6
Samples: 4
Max nTPM: 137.1
Min nTPM: 80.4
RHH5210_R3581
137.1
RHH5302_R3668
80.4
RHH5238_R3610
130.9
RHH5267_R3639
110.0
Memory CD4 T-cell Th1/Th17 nTPM: 138.9
Samples: 4
Max nTPM: 165.8
Min nTPM: 108.1
RHH5303_R3669
108.1
RHH5211_R3582
165.8
RHH5239_R3611
163.0
RHH5268_R3640
118.6
Memory CD4 T-cell Th17 nTPM: 145.5
Samples: 4
Max nTPM: 173.5
Min nTPM: 130.6
RHH5304_R3670
130.9
RHH5212_R3583
173.5
RHH5240_R3612
147.1
RHH5269_R3641
130.6
Memory CD4 T-cell Th2 nTPM: 151.3
Samples: 4
Max nTPM: 201.7
Min nTPM: 121.5
RHH5305_R3671
149.7
RHH5213_R3584
201.7
RHH5241_R3613
121.5
RHH5270_R3642
132.3
Naive CD4 T-cell nTPM: 106.0
Samples: 4
Max nTPM: 132.3
Min nTPM: 80.1
RHH5306_R3672
80.1
RHH5214_R3585
132.3
RHH5242_R3614
90.7
RHH5271_R3643
120.7
Naive CD8 T-cell nTPM: 139.5
Samples: 4
Max nTPM: 190.8
Min nTPM: 103.0
RHH5201_R3572
160.4
RHH5229_R3601
190.8
RHH5258_R3630
103.0
RHH5287_R3659
103.8
Non-Vd2 gdTCR nTPM: 264.3
Samples: 4
Max nTPM: 402.5
Min nTPM: 186.0
RHH5235_R3607
273.4
RHH5264_R3636
195.2
RHH5207_R3578
402.5
RHH5299_R3665
186.0
T-reg nTPM: 138.9
Samples: 4
Max nTPM: 159.3
Min nTPM: 112.3
RHH5301_R3667
112.3
RHH5237_R3609
153.9
RHH5266_R3638
130.0
RHH5209_R3580
159.3
Terminal effector memory CD4 T-cell nTPM: 172.6
Samples: 2
Max nTPM: 209.4
Min nTPM: 135.7
RHH5243_R3615
209.4
RHH5272_R3644
135.7
Terminal effector memory CD8 T-cell nTPM: 224.3
Samples: 4
Max nTPM: 268.7
Min nTPM: 173.7
RHH5232_R3604
268.7
RHH5204_R3575
243.5
RHH5261_R3633
211.2
RHH5296_R3662
173.7
Vd2 gdTCR nTPM: 196.6
Samples: 4
Max nTPM: 242.1
Min nTPM: 107.3
RHH5234_R3606
226.7
RHH5206_R3577
242.1
RHH5263_R3635
210.2
RHH5298_R3664
107.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
