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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
101.3
nTPM
FANTOM5:
219.2
Scaled Tags Per Million
Pig:
77.5
nTPM
Allen mouse:
0.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
101.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 94.6
2188
Female, age 91, both hemispheres
117.0
2090
Male, age 80, both hemispheres
113.0
2301
Female, age 85, both hemispheres
96.1
1984
Male, age 76, both hemispheres
52.3
Dorsal cochlear nucleus nTPM: 79.3
2378
Male, age 80, both hemispheres
109.3
2187
Female, age 91, both hemispheres
88.9
2802
Male, age 74, right hemisphere
70.1
2058
Male, age 76, both hemispheres
67.9
2370
Male, age 61, both hemispheres
60.2
Dorsal tegmental nucleus nTPM: 64.2
2326
Male, age 74, both hemispheres
81.2
2083
Male, age 80, both hemispheres
78.2
1936
Male, age 76, left hemisphere
60.1
2358
Male, age 61, both hemispheres
37.2
Dorsolateral tegmental area nTPM: 72.5
2751
Female, age 85, both hemispheres
108.0
2337
Male, age 61, both hemispheres
84.6
2654
Male, age 80, both hemispheres
81.0
2360
Male, age 74, both hemispheres
50.1
2141
Male, age 76, both hemispheres
38.8
Kolliker-Fuse nucleus nTPM: 78.6
2793
Female, age 91, left hemisphere
105.8
2315
Male, age 76, right hemisphere
68.1
2163
Male, age 80, both hemispheres
62.0
Lateral lemniscal nuclei nTPM: 73.6
2320
Female, age 91, left hemisphere
93.3
2746
Female, age 85, left hemisphere
74.2
2036
Male, age 80, both hemispheres
69.9
2169
Male, age 76, both hemispheres
67.5
2453
Male, age 74, right hemisphere
62.9
Lateral parabrachial nucleus nTPM: 97.7
2792
Male, age 76, both hemispheres
164.4
2013
Male, age 80, both hemispheres
100.8
2139
Female, age 85, right hemisphere
64.6
2790
Male, age 61, both hemispheres
60.8
Lateral vestibular nucleus nTPM: 71.6
2311
Male, age 80, both hemispheres
85.1
2184
Male, age 76, both hemispheres
58.0
Locus coeruleus nTPM: 38.7
2162
Male, age 80, both hemispheres
53.6
2720
Male, age 74, both hemispheres
44.7
2788
Male, age 74, unknown
41.0
2317
Female, age 72, unknown
40.1
2123
Female, age 91, both hemispheres
33.9
2014
Male, age 55, unknown
31.3
1980
Male, age 76, both hemispheres
26.4
Medial parabrachial nucleus nTPM: 67.9
2854
Male, age 80, both hemispheres
81.0
2170
Female, age 91, both hemispheres
75.2
2463
Female, age 85, right hemisphere
74.2
2786
Male, age 76, both hemispheres
66.1
2156
Male, age 61, both hemispheres
43.2
Medial periolivary nuclei nTPM: 82.4
2791
Male, age 74, right hemisphere
117.4
2081
Male, age 80, both hemispheres
90.2
2458
Female, age 91, both hemispheres
81.3
2063
Male, age 76, both hemispheres
78.7
2171
Female, age 85, both hemispheres
44.7
Motor facial nucleus nTPM: 83.0
2365
Male, age 74, right hemisphere
113.5
2697
Female, age 85, both hemispheres
103.0
2126
Male, age 61, both hemispheres
90.5
2795
Female, age 91, both hemispheres
65.8
2327
Male, age 80, both hemispheres
64.7
2062
Male, age 76, both hemispheres
60.6
Motor trigeminal nucleus nTPM: 65.6
2321
Female, age 91, both hemispheres
73.6
2560
Male, age 74, both hemispheres
69.5
2079
Male, age 80, both hemispheres
64.4
2309
Male, age 76, both hemispheres
64.4
2335
Male, age 61, both hemispheres
56.0
Nuclei of the trapezoid body nTPM: 67.2
1983
Male, age 76, both hemispheres
78.8
2368
Female, age 91, both hemispheres
75.8
2166
Male, age 80, both hemispheres
75.1
2159
Male, age 61, both hemispheres
64.5
2735
Female, age 85, both hemispheres
41.9
Nucleus raphe magnus nTPM: 67.0
2051
Male, age 76, both hemispheres
84.3
2459
Female, age 91, both hemispheres
82.9
2328
Male, age 80, both hemispheres
81.0
2455
Male, age 74, both hemispheres
77.1
2160
Male, age 61, both hemispheres
43.2
2172
Female, age 85, both hemispheres
33.6
Paramedian reticular nucleus nTPM: 84.2
2052
Male, age 76, both hemispheres
111.8
2057
Male, age 80, both hemispheres
81.9
2050
Female, age 85, both hemispheres
73.6
2313
Male, age 61, both hemispheres
69.6
Pedunculopontine tegmental nucleus nTPM: 72.9
2338
Male, age 61, both hemispheres
82.4
2334
Male, age 80, both hemispheres
74.2
1921
Female, age 85, both hemispheres
62.2
Pontine nuclei nTPM: 85.2
2454
Male, age 74, left hemisphere
135.1
2319
Female, age 91, both hemispheres
119.1
2109
Female, age 72, unknown
89.7
1968
Male, age 76, left hemisphere
83.0
1863
Male, age 55, unknown
79.9
2115
Male, age 80, left hemisphere
71.8
2727
Male, age 61, right hemisphere
65.4
2787
Female, age 85, both hemispheres
37.9
Pontine raphe nucleus nTPM: 50.8
2122
Female, age 85, midline
51.6
2853
Male, age 76, midline
50.0
Posteroventral cochlear nucleus nTPM: 101.3
2135
Female, age 91, both hemispheres
140.5
2341
Male, age 80, both hemispheres
138.7
2070
Male, age 76, both hemispheres
95.1
2371
Male, age 61, both hemispheres
67.0
2752
Female, age 85, both hemispheres
65.2
Principal sensory trigeminal nucleus nTPM: 67.1
2367
Female, age 91, left hemisphere
108.1
2324
Male, age 76, both hemispheres
58.7
2008
Male, age 80, left hemisphere
58.4
2158
Male, age 61, both hemispheres
43.2
Reticular pontine nucleus, caudal nTPM: 85.3
2457
Female, age 91, both hemispheres
107.0
2559
Male, age 74, both hemispheres
93.7
2092
Male, age 76, both hemispheres
90.6
2332
Male, age 80, right hemisphere
49.7
Reticular pontine nucleus, oral nTPM: 98.9
2366
Female, age 91, both hemispheres
126.1
2361
Male, age 74, both hemispheres
123.6
1939
Male, age 80, both hemispheres
87.4
2012
Female, age 85, both hemispheres
82.6
2167
Male, age 76, both hemispheres
74.9
Reticulotegmental nucleus nTPM: 61.1
2322
Female, age 91, both hemispheres
79.1
2333
Male, age 80, both hemispheres
64.3
2452
Male, age 74, both hemispheres
59.6
2325
Male, age 76, both hemispheres
41.4
Spinal trigeminal nucleus, oral nTPM: 65.9
1978
Male, age 76, both hemispheres
74.9
2164
Male, age 80, both hemispheres
71.7
2737
Female, age 85, both hemispheres
51.1
Subcoeruleus area nTPM: 75.8
2369
Female, age 85, left hemisphere
133.8
1958
Male, age 80, both hemispheres
72.5
2089
Male, age 76, left hemisphere
71.6
2323
Female, age 91, left hemisphere
54.6
2451
Male, age 74, both hemispheres
46.7
Superior olive nTPM: 93.6
2020
Male, age 76, both hemispheres
125.3
2364
Male, age 74, right hemisphere
118.9
2329
Male, age 80, right hemisphere
77.2
1875
Female, age 85, both hemispheres
76.3
2561
Female, age 91, both hemispheres
70.2
Ventral periolivary nuclei nTPM: 80.7
2023
Male, age 76, both hemispheres
139.9
2165
Male, age 80, both hemispheres
71.0
2794
Female, age 91, left hemisphere
58.9
2130
Female, age 85, both hemispheres
52.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 89.6
2359
Male, age 61, both hemispheres
117.7
1959
Male, age 76, both hemispheres
94.5
2840
Female, age 85, both hemispheres
86.3
2456
Female, age 91, both hemispheres
81.7
2161
Male, age 80, both hemispheres
79.1
2449
Male, age 74, both hemispheres
78.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
77.5
Pig sample
Sample description
nTPM
Pons nTPM: 77.5
Samples: 4
Max nTPM: 101.9
Min nTPM: 54.4
Sample A
Female
67.8
Sample B
Female
54.4
Sample C
Male
85.8
Sample D
Male
101.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
