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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
13.5
nTPM
Monaco:
19.0
nTPM
Schmiedel:
18.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.5
HPA sample
nTPM
gdT-cell nTPM: 13.5
Samples: 6
Max nTPM: 20.3
Min nTPM: 6.4
P10809_1007
20.3
P10809_1022
15.5
P10809_1041
14.8
P10809_1060
10.8
P10809_1077
13.3
P10809_1098
6.4
MAIT T-cell nTPM: 11.9
Samples: 6
Max nTPM: 24.7
Min nTPM: 6.6
P10809_1006
11.7
P10809_1024
8.8
P10809_1043
6.6
P10809_1062
11.8
P10809_1083
24.7
P10809_1097
7.9
Memory CD4 T-cell nTPM: 10.5
Samples: 6
Max nTPM: 17.3
Min nTPM: 3.9
P10809_1014
5.8
P10809_1026
16.2
P10809_1045
13.4
P10809_1064
17.3
P10809_1086
6.5
P10809_1113
3.9
Memory CD8 T-cell nTPM: 11.3
Samples: 5
Max nTPM: 16.4
Min nTPM: 6.2
P10809_1012
6.2
P10809_1027
11.3
P10809_1046
14.5
P10809_1065
16.4
P10809_1111
8.0
Naive CD4 T-cell nTPM: 10.1
Samples: 6
Max nTPM: 18.2
Min nTPM: 4.8
P10809_1015
4.8
P10809_1030
18.2
P10809_1049
14.2
P10809_1068
6.9
P10809_1085
10.0
P10809_1112
6.6
Naive CD8 T-cell nTPM: 10.4
Samples: 6
Max nTPM: 13.2
Min nTPM: 7.8
P10809_1016
13.2
P10809_1031
9.1
P10809_1050
10.1
P10809_1069
11.6
P10809_1087
7.8
P10809_1110
10.4
T-reg nTPM: 5.4
Samples: 6
Max nTPM: 9.2
Min nTPM: 2.9
P10809_1018
2.9
P10809_1037
9.2
P10809_1056
7.3
P10809_1075
3.0
P10809_1094
3.7
P10809_1106
6.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.0
Samples: 4
Max nTPM: 16.2
Min nTPM: 7.5
RHH5202_R3573
7.5
RHH5230_R3602
16.1
RHH5259_R3631
16.2
RHH5288_R3660
16.0
Effector memory CD8 T-cell nTPM: 8.7
Samples: 4
Max nTPM: 13.1
Min nTPM: 4.2
RHH5203_R3574
4.2
RHH5231_R3603
7.6
RHH5260_R3632
13.1
RHH5289_R3661
9.9
MAIT T-cell nTPM: 15.7
Samples: 4
Max nTPM: 26.5
Min nTPM: 4.7
RHH5233_R3605
4.7
RHH5205_R3576
17.5
RHH5262_R3634
14.1
RHH5297_R3663
26.5
Memory CD4 T-cell TFH nTPM: 10.9
Samples: 4
Max nTPM: 13.0
Min nTPM: 8.9
RHH5300_R3666
13.0
RHH5236_R3608
12.3
RHH5265_R3637
9.3
RHH5208_R3579
8.9
Memory CD4 T-cell Th1 nTPM: 11.9
Samples: 4
Max nTPM: 13.8
Min nTPM: 10.7
RHH5210_R3581
13.8
RHH5302_R3668
11.2
RHH5238_R3610
10.7
RHH5267_R3639
12.0
Memory CD4 T-cell Th1/Th17 nTPM: 14.6
Samples: 4
Max nTPM: 21.6
Min nTPM: 4.7
RHH5303_R3669
4.7
RHH5211_R3582
16.7
RHH5239_R3611
21.6
RHH5268_R3640
15.4
Memory CD4 T-cell Th17 nTPM: 10.4
Samples: 4
Max nTPM: 15.5
Min nTPM: 3.4
RHH5304_R3670
7.1
RHH5212_R3583
15.4
RHH5240_R3612
3.4
RHH5269_R3641
15.5
Memory CD4 T-cell Th2 nTPM: 7.9
Samples: 4
Max nTPM: 14.7
Min nTPM: 3.8
RHH5305_R3671
8.3
RHH5213_R3584
3.8
RHH5241_R3613
4.9
RHH5270_R3642
14.7
Naive CD4 T-cell nTPM: 18.4
Samples: 4
Max nTPM: 21.4
Min nTPM: 14.1
RHH5306_R3672
14.1
RHH5214_R3585
17.6
RHH5242_R3614
21.4
RHH5271_R3643
20.5
Naive CD8 T-cell nTPM: 12.8
Samples: 4
Max nTPM: 22.1
Min nTPM: 7.1
RHH5201_R3572
7.1
RHH5229_R3601
12.0
RHH5258_R3630
10.0
RHH5287_R3659
22.1
Non-Vd2 gdTCR nTPM: 17.1
Samples: 4
Max nTPM: 35.2
Min nTPM: 9.6
RHH5235_R3607
12.6
RHH5264_R3636
9.6
RHH5207_R3578
10.9
RHH5299_R3665
35.2
T-reg nTPM: 12.6
Samples: 4
Max nTPM: 14.3
Min nTPM: 10.8
RHH5301_R3667
14.3
RHH5237_R3609
10.8
RHH5266_R3638
11.6
RHH5209_R3580
13.5
Terminal effector memory CD4 T-cell nTPM: 8.9
Samples: 2
Max nTPM: 10.1
Min nTPM: 7.7
RHH5243_R3615
7.7
RHH5272_R3644
10.1
Terminal effector memory CD8 T-cell nTPM: 13.3
Samples: 4
Max nTPM: 20.8
Min nTPM: 5.9
RHH5232_R3604
14.3
RHH5204_R3575
20.8
RHH5261_R3633
12.3
RHH5296_R3662
5.9
Vd2 gdTCR nTPM: 19.0
Samples: 4
Max nTPM: 27.0
Min nTPM: 9.7
RHH5234_R3606
9.7
RHH5206_R3577
21.5
RHH5263_R3635
17.6
RHH5298_R3664
27.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
