HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:34.3 nTPM
HPA Brain:37.4 nTPM
GTEx:34.3 nTPM
FANTOM5:94.3 Scaled Tags Per Million
Pig:18.6 nTPM
Mouse:20.5 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028379Antibody HPA029025
Glial cells MediumMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.4
Sample id Sample description nTPM
Hippocampus
nTPM: 35.9
2621 Female, age 67, right hemisphere 38.3
2148 Female, age 91, left hemisphere 37.3
1855 Male, age 76, left hemisphere 36.8
1911 Female, age 85, right hemisphere 36.7
1898 Male, age 80, left hemisphere 33.3
2529 Female, age 94, left hemisphere 33.2
Dentate gyrus
nTPM: 35.9
2531 Female, age 67, both hemispheres 40.6
2530 Female, age 94, left hemisphere 36.4
2528 Male, age 74, both hemispheres 35.4
2010 Male, age 76, both hemispheres 34.8
2246 Female, age 85, both hemispheres 34.4
1927 Female, age 91, both hemispheres 33.9
Entorhinal gyrus
nTPM: 34.8
2764 Male, age 80, right hemisphere 39.6
1787 Male, age 76, left hemisphere 37.1
2613 Female, age 94, left hemisphere 34.8
2117 Female, age 91, right hemisphere 32.8
2686 Male, age 75, right hemisphere 32.7
1938 Female, age 85, left hemisphere 31.7
Hippocampus, CA1
nTPM: 35.9
2045 Male, age 76, both hemispheres 38.0
1873 Female, age 85, both hemispheres 36.9
2082 Female, age 91, right hemisphere 35.1
2749 Male, age 80, left hemisphere 34.8
2527 Male, age 74, both hemispheres 34.6
Hippocampus, CA2
nTPM: 33.1
2437 Female, age 94, left hemisphere 36.3
2249 Male, age 74, both hemispheres 34.4
2113 Female, age 91, right hemisphere 32.9
1892 Male, age 76, both hemispheres 32.3
1940 Female, age 85, left hemisphere 31.5
1963 Male, age 80, left hemisphere 31.2
Hippocampus, CA3
nTPM: 37.4
2620 Female, age 94, left hemisphere 53.6
2436 Male, age 74, both hemispheres 37.9
1867 Male, age 76, both hemispheres 34.7
1891 Female, age 85, both hemispheres 34.7
2861 Female, age 67, both hemispheres 32.3
2137 Male, age 80, left hemisphere 31.3
Parahippocampal cortex
nTPM: 34.0
2692 Male, age 74, both hemispheres 39.9
2622 Female, age 67, right hemisphere 37.3
1850 Male, age 80, both hemispheres 36.0
2018 Male, age 76, both hemispheres 35.6
1990 Female, age 91, right hemisphere 34.9
2532 Female, age 72, left hemisphere 34.1
2693 Female, age 94, both hemispheres 33.3
2245 Female, age 91, both hemispheres 31.4
1933 Female, age 85, both hemispheres 29.0
2250 Female, age 67, right hemisphere 28.7
Perirhinal gyrus
nTPM: 33.1
2848 Male, age 76, right hemisphere 36.8
1794 Male, age 80, right hemisphere 35.8
2521 Female, age 94, right hemisphere 31.5
1841 Female, age 85, right hemisphere 30.9
1847 Female, age 91, left hemisphere 30.8
Subiculum
nTPM: 35.6
2438 Female, age 94, left hemisphere 47.6
2042 Male, age 76, both hemispheres 35.5
2619 Male, age 74, both hemispheres 35.3
1901 Male, age 80, both hemispheres 33.7
1977 Female, age 85, both hemispheres 31.8
2729 Female, age 91, right hemisphere 30.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.3
Samples: 197

Max nTPM: 76.3
Min nTPM: 19.3
Std nTPM: 6.8
Median nTPM: 33.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 76.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 58.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 54.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 51.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 48.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 48.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 47.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 47.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 46.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 45.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 42.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.3
FF:10169-103B7 60 years, female 115.2
FF:10153-102I9 76 years, female 73.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.6
Pig sample Sample description nTPM
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 20.3
Min nTPM: 12.8
Sample A Female 20.3
Sample B Female 13.4
Sample C Male 16.4
Sample D Male 12.8
Dorsal hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 24.6
Min nTPM: 12.6
Sample A Female 24.6
Sample B Female 18.8
Sample C Male 18.2
Sample D Male 12.6
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.3
Sample A Female 18.7
Sample B Female 15.7
Sample C Male 19.6
Sample D Male 13.3
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 25.7
Min nTPM: 12.5
Sample A Female 18.3
Sample B Female 12.5
Sample C Male 25.7
Sample D Male 17.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 21.3
Min nTPM: 18.5
Sample A Male 19.9
Sample B Male 19.7
Sample C Female 21.3
Sample D Female 18.5
Hippocampal formation
nTPM: 20.5
Samples: 4

Max nTPM: 22.0
Min nTPM: 18.1
Sample A Male 21.2
Sample B Male 18.1
Sample C Female 20.6
Sample D Female 22.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
74357611 Antisense, RP_060119_03_B01, Mouse strain C57BL/6J (56 days, male) 3.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org