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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.4
nTPM
Monaco:
137.9
nTPM
Schmiedel:
67.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.4
HPA sample
nTPM
gdT-cell nTPM: 65.0
Samples: 6
Max nTPM: 106.2
Min nTPM: 39.4
P10809_1007
39.4
P10809_1022
73.9
P10809_1041
106.2
P10809_1060
60.1
P10809_1077
46.0
P10809_1098
64.4
MAIT T-cell nTPM: 68.5
Samples: 6
Max nTPM: 84.8
Min nTPM: 56.9
P10809_1006
56.9
P10809_1024
75.5
P10809_1043
65.4
P10809_1062
70.6
P10809_1083
57.8
P10809_1097
84.8
Memory CD4 T-cell nTPM: 56.2
Samples: 6
Max nTPM: 65.1
Min nTPM: 45.7
P10809_1014
45.7
P10809_1026
62.4
P10809_1045
65.1
P10809_1064
54.7
P10809_1086
46.3
P10809_1113
63.0
Memory CD8 T-cell nTPM: 59.5
Samples: 5
Max nTPM: 75.0
Min nTPM: 48.7
P10809_1012
52.4
P10809_1027
48.7
P10809_1046
75.0
P10809_1065
52.4
P10809_1111
69.0
Naive CD4 T-cell nTPM: 51.8
Samples: 6
Max nTPM: 58.6
Min nTPM: 39.9
P10809_1015
39.9
P10809_1030
41.6
P10809_1049
58.4
P10809_1068
54.8
P10809_1085
57.6
P10809_1112
58.6
Naive CD8 T-cell nTPM: 50.0
Samples: 6
Max nTPM: 63.7
Min nTPM: 39.4
P10809_1016
41.5
P10809_1031
63.7
P10809_1050
56.0
P10809_1069
55.8
P10809_1087
39.4
P10809_1110
43.6
T-reg nTPM: 78.4
Samples: 6
Max nTPM: 88.0
Min nTPM: 66.3
P10809_1018
66.3
P10809_1037
85.7
P10809_1056
78.6
P10809_1075
77.0
P10809_1094
74.8
P10809_1106
88.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 108.1
Samples: 4
Max nTPM: 134.8
Min nTPM: 82.2
RHH5202_R3573
134.8
RHH5230_R3602
105.1
RHH5259_R3631
82.2
RHH5288_R3660
110.4
Effector memory CD8 T-cell nTPM: 130.9
Samples: 4
Max nTPM: 150.3
Min nTPM: 113.4
RHH5203_R3574
113.4
RHH5231_R3603
133.2
RHH5260_R3632
126.6
RHH5289_R3661
150.3
MAIT T-cell nTPM: 118.3
Samples: 4
Max nTPM: 162.2
Min nTPM: 96.4
RHH5233_R3605
111.2
RHH5205_R3576
162.2
RHH5262_R3634
103.4
RHH5297_R3663
96.4
Memory CD4 T-cell TFH nTPM: 116.1
Samples: 4
Max nTPM: 132.0
Min nTPM: 105.7
RHH5300_R3666
105.7
RHH5236_R3608
132.0
RHH5265_R3637
110.3
RHH5208_R3579
116.5
Memory CD4 T-cell Th1 nTPM: 85.1
Samples: 4
Max nTPM: 91.8
Min nTPM: 79.9
RHH5210_R3581
79.9
RHH5302_R3668
88.1
RHH5238_R3610
80.7
RHH5267_R3639
91.8
Memory CD4 T-cell Th1/Th17 nTPM: 112.1
Samples: 4
Max nTPM: 129.6
Min nTPM: 92.1
RHH5303_R3669
129.6
RHH5211_R3582
121.5
RHH5239_R3611
92.1
RHH5268_R3640
105.1
Memory CD4 T-cell Th17 nTPM: 119.4
Samples: 4
Max nTPM: 135.7
Min nTPM: 97.7
RHH5304_R3670
126.8
RHH5212_R3583
97.7
RHH5240_R3612
135.7
RHH5269_R3641
117.4
Memory CD4 T-cell Th2 nTPM: 112.3
Samples: 4
Max nTPM: 128.7
Min nTPM: 105.1
RHH5305_R3671
108.6
RHH5213_R3584
128.7
RHH5241_R3613
106.8
RHH5270_R3642
105.1
Naive CD4 T-cell nTPM: 90.2
Samples: 4
Max nTPM: 121.5
Min nTPM: 73.2
RHH5306_R3672
88.8
RHH5214_R3585
73.2
RHH5242_R3614
77.1
RHH5271_R3643
121.5
Naive CD8 T-cell nTPM: 84.5
Samples: 4
Max nTPM: 88.8
Min nTPM: 81.7
RHH5201_R3572
83.0
RHH5229_R3601
81.7
RHH5258_R3630
84.6
RHH5287_R3659
88.8
Non-Vd2 gdTCR nTPM: 114.6
Samples: 4
Max nTPM: 138.8
Min nTPM: 98.7
RHH5235_R3607
98.7
RHH5264_R3636
138.8
RHH5207_R3578
111.0
RHH5299_R3665
109.8
T-reg nTPM: 113.4
Samples: 4
Max nTPM: 123.0
Min nTPM: 87.6
RHH5301_R3667
121.6
RHH5237_R3609
121.3
RHH5266_R3638
123.0
RHH5209_R3580
87.6
Terminal effector memory CD4 T-cell nTPM: 137.9
Samples: 2
Max nTPM: 153.6
Min nTPM: 122.2
RHH5243_R3615
122.2
RHH5272_R3644
153.6
Terminal effector memory CD8 T-cell nTPM: 108.8
Samples: 4
Max nTPM: 144.7
Min nTPM: 83.8
RHH5232_R3604
144.7
RHH5204_R3575
83.8
RHH5261_R3633
102.7
RHH5296_R3662
103.9
Vd2 gdTCR nTPM: 121.9
Samples: 4
Max nTPM: 146.5
Min nTPM: 84.8
RHH5234_R3606
124.3
RHH5206_R3577
146.5
RHH5263_R3635
131.9
RHH5298_R3664
84.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
