We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.6
nTPM
Monaco:
244.3
nTPM
Schmiedel:
246.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.6
HPA sample
nTPM
gdT-cell nTPM: 49.6
Samples: 6
Max nTPM: 58.2
Min nTPM: 37.4
P10809_1007
53.3
P10809_1022
51.1
P10809_1041
42.3
P10809_1060
55.4
P10809_1077
37.4
P10809_1098
58.2
MAIT T-cell nTPM: 49.9
Samples: 6
Max nTPM: 79.2
Min nTPM: 39.4
P10809_1006
79.2
P10809_1024
39.4
P10809_1043
42.9
P10809_1062
54.7
P10809_1083
39.5
P10809_1097
43.9
Memory CD4 T-cell nTPM: 51.6
Samples: 6
Max nTPM: 74.0
Min nTPM: 38.8
P10809_1014
74.0
P10809_1026
56.2
P10809_1045
48.8
P10809_1064
41.5
P10809_1086
38.8
P10809_1113
50.1
Memory CD8 T-cell nTPM: 46.5
Samples: 5
Max nTPM: 75.6
Min nTPM: 34.8
P10809_1012
75.6
P10809_1027
35.4
P10809_1046
43.9
P10809_1065
34.8
P10809_1111
43.0
Naive CD4 T-cell nTPM: 50.3
Samples: 6
Max nTPM: 67.7
Min nTPM: 37.8
P10809_1015
67.7
P10809_1030
45.4
P10809_1049
37.8
P10809_1068
51.3
P10809_1085
40.8
P10809_1112
58.5
Naive CD8 T-cell nTPM: 44.8
Samples: 6
Max nTPM: 70.5
Min nTPM: 26.7
P10809_1016
70.5
P10809_1031
46.7
P10809_1050
40.2
P10809_1069
42.4
P10809_1087
26.7
P10809_1110
42.3
T-reg nTPM: 48.5
Samples: 6
Max nTPM: 80.1
Min nTPM: 34.7
P10809_1018
80.1
P10809_1037
39.8
P10809_1056
48.5
P10809_1075
34.7
P10809_1094
49.5
P10809_1106
38.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
244.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 210.6
Samples: 4
Max nTPM: 256.3
Min nTPM: 190.1
RHH5202_R3573
190.1
RHH5230_R3602
191.6
RHH5259_R3631
256.3
RHH5288_R3660
204.4
Effector memory CD8 T-cell nTPM: 195.8
Samples: 4
Max nTPM: 220.3
Min nTPM: 168.3
RHH5203_R3574
181.6
RHH5231_R3603
168.3
RHH5260_R3632
220.3
RHH5289_R3661
212.9
MAIT T-cell nTPM: 185.6
Samples: 4
Max nTPM: 198.7
Min nTPM: 168.7
RHH5233_R3605
178.3
RHH5205_R3576
198.7
RHH5262_R3634
168.7
RHH5297_R3663
196.6
Memory CD4 T-cell TFH nTPM: 235.2
Samples: 4
Max nTPM: 250.5
Min nTPM: 203.3
RHH5300_R3666
241.3
RHH5236_R3608
245.5
RHH5265_R3637
203.3
RHH5208_R3579
250.5
Memory CD4 T-cell Th1 nTPM: 238.1
Samples: 4
Max nTPM: 260.4
Min nTPM: 216.3
RHH5210_R3581
257.9
RHH5302_R3668
216.3
RHH5238_R3610
260.4
RHH5267_R3639
217.7
Memory CD4 T-cell Th1/Th17 nTPM: 231.1
Samples: 4
Max nTPM: 260.2
Min nTPM: 197.6
RHH5303_R3669
247.1
RHH5211_R3582
219.4
RHH5239_R3611
260.2
RHH5268_R3640
197.6
Memory CD4 T-cell Th17 nTPM: 235.7
Samples: 4
Max nTPM: 285.7
Min nTPM: 210.8
RHH5304_R3670
210.8
RHH5212_R3583
224.1
RHH5240_R3612
285.7
RHH5269_R3641
222.3
Memory CD4 T-cell Th2 nTPM: 244.3
Samples: 4
Max nTPM: 298.2
Min nTPM: 196.0
RHH5305_R3671
266.8
RHH5213_R3584
298.2
RHH5241_R3613
196.0
RHH5270_R3642
216.2
Naive CD4 T-cell nTPM: 243.0
Samples: 4
Max nTPM: 256.8
Min nTPM: 227.7
RHH5306_R3672
256.8
RHH5214_R3585
240.1
RHH5242_R3614
247.2
RHH5271_R3643
227.7
Naive CD8 T-cell nTPM: 220.2
Samples: 4
Max nTPM: 237.4
Min nTPM: 196.5
RHH5201_R3572
234.9
RHH5229_R3601
237.4
RHH5258_R3630
196.5
RHH5287_R3659
212.0
Non-Vd2 gdTCR nTPM: 176.4
Samples: 4
Max nTPM: 178.6
Min nTPM: 174.9
RHH5235_R3607
176.5
RHH5264_R3636
175.7
RHH5207_R3578
178.6
RHH5299_R3665
174.9
T-reg nTPM: 213.2
Samples: 4
Max nTPM: 225.7
Min nTPM: 204.6
RHH5301_R3667
204.6
RHH5237_R3609
208.6
RHH5266_R3638
225.7
RHH5209_R3580
213.9
Terminal effector memory CD4 T-cell nTPM: 205.7
Samples: 2
Max nTPM: 212.2
Min nTPM: 199.1
RHH5243_R3615
212.2
RHH5272_R3644
199.1
Terminal effector memory CD8 T-cell nTPM: 191.0
Samples: 4
Max nTPM: 230.0
Min nTPM: 147.5
RHH5232_R3604
230.0
RHH5204_R3575
147.5
RHH5261_R3633
200.9
RHH5296_R3662
185.6
Vd2 gdTCR nTPM: 180.5
Samples: 4
Max nTPM: 211.8
Min nTPM: 144.1
RHH5234_R3606
178.1
RHH5206_R3577
188.1
RHH5263_R3635
211.8
RHH5298_R3664
144.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
