HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:1.6 nTPM
HPA Brain:17.6 nTPM
GTEx:1.6 nTPM
FANTOM5:12.9 Scaled Tags Per Million
Mouse:9.9 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005728
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 13.6
2621 Female, age 67, right hemisphere 17.5
2148 Female, age 91, left hemisphere 15.7
2529 Female, age 94, left hemisphere 13.9
1911 Female, age 85, right hemisphere 13.1
1855 Male, age 76, left hemisphere 11.4
1898 Male, age 80, left hemisphere 10.0
Dentate gyrus
nTPM: 12.4
2531 Female, age 67, both hemispheres 18.8
2246 Female, age 85, both hemispheres 14.9
1927 Female, age 91, both hemispheres 12.3
2528 Male, age 74, both hemispheres 10.8
2530 Female, age 94, left hemisphere 9.0
2010 Male, age 76, both hemispheres 8.5
Entorhinal gyrus
nTPM: 17.6
2613 Female, age 94, left hemisphere 26.0
2686 Male, age 75, right hemisphere 19.6
1938 Female, age 85, left hemisphere 17.9
2764 Male, age 80, right hemisphere 15.7
1787 Male, age 76, left hemisphere 15.4
2117 Female, age 91, right hemisphere 10.9
Hippocampus, CA1
nTPM: 13.2
2749 Male, age 80, left hemisphere 15.8
2527 Male, age 74, both hemispheres 13.3
2045 Male, age 76, both hemispheres 12.8
2082 Female, age 91, right hemisphere 12.3
1873 Female, age 85, both hemispheres 11.7
Hippocampus, CA2
nTPM: 12.2
2437 Female, age 94, left hemisphere 13.9
1963 Male, age 80, left hemisphere 13.0
1892 Male, age 76, both hemispheres 12.7
2113 Female, age 91, right hemisphere 12.5
1940 Female, age 85, left hemisphere 12.1
2249 Male, age 74, both hemispheres 8.9
Hippocampus, CA3
nTPM: 15.0
2137 Male, age 80, left hemisphere 19.9
2861 Female, age 67, both hemispheres 18.2
2620 Female, age 94, left hemisphere 17.4
1867 Male, age 76, both hemispheres 13.2
1891 Female, age 85, both hemispheres 12.2
2436 Male, age 74, both hemispheres 8.8
Parahippocampal cortex
nTPM: 16.8
2622 Female, age 67, right hemisphere 22.5
2532 Female, age 72, left hemisphere 19.7
2692 Male, age 74, both hemispheres 18.1
2245 Female, age 91, both hemispheres 17.5
2693 Female, age 94, both hemispheres 16.9
2250 Female, age 67, right hemisphere 15.8
1933 Female, age 85, both hemispheres 15.1
1850 Male, age 80, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.3
2018 Male, age 76, both hemispheres 13.8
Perirhinal gyrus
nTPM: 14.3
2848 Male, age 76, right hemisphere 15.9
1847 Female, age 91, left hemisphere 15.0
2521 Female, age 94, right hemisphere 14.1
1841 Female, age 85, right hemisphere 13.9
1794 Male, age 80, right hemisphere 12.6
Subiculum
nTPM: 14.4
2438 Female, age 94, left hemisphere 18.1
2619 Male, age 74, both hemispheres 15.7
1977 Female, age 85, both hemispheres 14.6
1901 Male, age 80, both hemispheres 13.8
2042 Male, age 76, both hemispheres 12.8
2729 Female, age 91, right hemisphere 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1.6
Samples: 197

Max nTPM: 4.1
Min nTPM: 0.4
Std nTPM: 0.6
Median nTPM: 1.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 4.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 3.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 3.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 3.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 3.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 3.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 3.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 3.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 3.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 2.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 2.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.9
FF:10153-102I9 76 years, female 16.6
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 12.6
Min nTPM: 8.5
Sample A Male 9.2
Sample B Male 9.4
Sample C Female 8.5
Sample D Female 12.6
Hippocampal formation
nTPM: 5.0
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.2
Sample A Male 5.0
Sample B Male 6.1
Sample C Female 4.6
Sample D Female 4.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
71393358 Antisense, RP_050825_02_A01, Mouse strain C57BL/6J (56 days, male) 2.2
73834499 Antisense, RP_051212_04_A08, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org