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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
161.3
nTPM
Monaco:
107.0
nTPM
Schmiedel:
62.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.3
HPA sample
nTPM
gdT-cell nTPM: 114.9
Samples: 6
Max nTPM: 138.8
Min nTPM: 72.9
P10809_1007
72.9
P10809_1022
117.0
P10809_1041
138.8
P10809_1060
119.3
P10809_1077
127.5
P10809_1098
113.6
MAIT T-cell nTPM: 135.5
Samples: 6
Max nTPM: 158.8
Min nTPM: 110.3
P10809_1006
110.3
P10809_1024
125.7
P10809_1043
129.1
P10809_1062
139.3
P10809_1083
149.7
P10809_1097
158.8
Memory CD4 T-cell nTPM: 141.6
Samples: 6
Max nTPM: 174.2
Min nTPM: 84.1
P10809_1014
84.1
P10809_1026
143.3
P10809_1045
164.3
P10809_1064
142.6
P10809_1086
174.2
P10809_1113
140.9
Memory CD8 T-cell nTPM: 127.9
Samples: 5
Max nTPM: 144.9
Min nTPM: 91.3
P10809_1012
91.3
P10809_1027
124.6
P10809_1046
137.9
P10809_1065
141.0
P10809_1111
144.9
Naive CD4 T-cell nTPM: 150.0
Samples: 6
Max nTPM: 239.2
Min nTPM: 83.9
P10809_1015
83.9
P10809_1030
147.0
P10809_1049
239.2
P10809_1068
154.1
P10809_1085
154.7
P10809_1112
121.0
Naive CD8 T-cell nTPM: 133.3
Samples: 6
Max nTPM: 167.8
Min nTPM: 82.7
P10809_1016
82.7
P10809_1031
104.0
P10809_1050
167.8
P10809_1069
145.4
P10809_1087
147.9
P10809_1110
151.8
T-reg nTPM: 161.3
Samples: 6
Max nTPM: 231.3
Min nTPM: 81.6
P10809_1018
81.6
P10809_1037
153.1
P10809_1056
231.3
P10809_1075
171.2
P10809_1094
151.5
P10809_1106
179.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 87.8
Samples: 4
Max nTPM: 127.6
Min nTPM: 37.1
RHH5202_R3573
102.8
RHH5230_R3602
83.7
RHH5259_R3631
37.1
RHH5288_R3660
127.6
Effector memory CD8 T-cell nTPM: 101.7
Samples: 4
Max nTPM: 134.5
Min nTPM: 63.1
RHH5203_R3574
102.9
RHH5231_R3603
106.4
RHH5260_R3632
63.1
RHH5289_R3661
134.5
MAIT T-cell nTPM: 95.6
Samples: 4
Max nTPM: 121.2
Min nTPM: 47.9
RHH5233_R3605
97.7
RHH5205_R3576
47.9
RHH5262_R3634
115.6
RHH5297_R3663
121.2
Memory CD4 T-cell TFH nTPM: 90.9
Samples: 4
Max nTPM: 111.7
Min nTPM: 72.3
RHH5300_R3666
89.8
RHH5236_R3608
111.7
RHH5265_R3637
72.3
RHH5208_R3579
89.9
Memory CD4 T-cell Th1 nTPM: 76.3
Samples: 4
Max nTPM: 113.4
Min nTPM: 50.9
RHH5210_R3581
50.9
RHH5302_R3668
113.4
RHH5238_R3610
78.6
RHH5267_R3639
62.2
Memory CD4 T-cell Th1/Th17 nTPM: 99.3
Samples: 4
Max nTPM: 139.9
Min nTPM: 61.4
RHH5303_R3669
139.9
RHH5211_R3582
97.7
RHH5239_R3611
61.4
RHH5268_R3640
98.2
Memory CD4 T-cell Th17 nTPM: 73.0
Samples: 4
Max nTPM: 88.0
Min nTPM: 66.4
RHH5304_R3670
70.5
RHH5212_R3583
67.1
RHH5240_R3612
88.0
RHH5269_R3641
66.4
Memory CD4 T-cell Th2 nTPM: 104.4
Samples: 4
Max nTPM: 137.7
Min nTPM: 73.1
RHH5305_R3671
98.3
RHH5213_R3584
108.3
RHH5241_R3613
137.7
RHH5270_R3642
73.1
Naive CD4 T-cell nTPM: 90.3
Samples: 4
Max nTPM: 116.3
Min nTPM: 66.4
RHH5306_R3672
116.3
RHH5214_R3585
105.6
RHH5242_R3614
72.9
RHH5271_R3643
66.4
Naive CD8 T-cell nTPM: 90.8
Samples: 4
Max nTPM: 109.2
Min nTPM: 62.4
RHH5201_R3572
103.3
RHH5229_R3601
62.4
RHH5258_R3630
109.2
RHH5287_R3659
88.4
Non-Vd2 gdTCR nTPM: 82.6
Samples: 4
Max nTPM: 106.5
Min nTPM: 67.9
RHH5235_R3607
69.4
RHH5264_R3636
86.7
RHH5207_R3578
67.9
RHH5299_R3665
106.5
T-reg nTPM: 96.6
Samples: 4
Max nTPM: 138.7
Min nTPM: 76.3
RHH5301_R3667
76.3
RHH5237_R3609
138.7
RHH5266_R3638
85.5
RHH5209_R3580
85.7
Terminal effector memory CD4 T-cell nTPM: 64.5
Samples: 2
Max nTPM: 86.1
Min nTPM: 42.8
RHH5243_R3615
42.8
RHH5272_R3644
86.1
Terminal effector memory CD8 T-cell nTPM: 99.0
Samples: 4
Max nTPM: 115.6
Min nTPM: 74.4
RHH5232_R3604
115.6
RHH5204_R3575
105.9
RHH5261_R3633
74.4
RHH5296_R3662
100.2
Vd2 gdTCR nTPM: 107.1
Samples: 4
Max nTPM: 126.9
Min nTPM: 88.5
RHH5234_R3606
98.4
RHH5206_R3577
114.4
RHH5263_R3635
88.5
RHH5298_R3664
126.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
